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B2UGG9 (B2UGG9_RALPJ) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Rpic_0501 EMBL ACD25656.1
OrganismRalstonia pickettii (strain 12J) [Complete proteome] [HAMAP] EMBL ACD25656.1
Taxonomic identifier402626 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeRalstonia

Protein attributes

Sequence length863 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B2UGG9 [UniParc].

Last modified July 1, 2008. Version 1.
Checksum: 9DA970BC9A4BD386

FASTA86395,459
        10         20         30         40         50         60 
MPRHLADYRS KRDFTQTQEP AGARRKADEQ RDHGALHFVI QKHDATRLHY DFRLELDGTL 

        70         80         90        100        110        120 
KSWAVPKGPS LDPADKRLAV HVEDHPLDYA DFEGHIPEGQ YGGGDVIVWD RGTWRPHGDP 

       130        140        150        160        170        180 
RKAYRDGKLK FDLHGEKLHG AWALVRTHLH GTGRHPKEQW LLIKERDDQV RASSDYDVTQ 

       190        200        210        220        230        240 
ALPASVITGE NVGAKPKAKA DGRKTQRADP AQVQPPAGAV PGTLPKTLEP QLATLVDAPP 

       250        260        270        280        290        300 
RQGEWNYEVK FDGYRILARI DGNTVRLFSR NGRDWTAKLP RQARTLQALG LREAWLDGEV 

       310        320        330        340        350        360 
VVMGERGVPD FQALQNAFET AHAEHIAYYL FDIPFCNGMD LRGVPLRERR ALLERILDAA 

       370        380        390        400        410        420 
PGNLDREAVL FSGTFHAAPE DLLSSACSMS LEGVIGKRAD APYRAGRSPA WIKLKCGQRQ 

       430        440        450        460        470        480 
EFVIGGYSAP KGSRSGFGAL LLGVYDDAGK LRYAGRVGTG FNETSLHALH HELTGLTVDT 

       490        500        510        520        530        540 
PPFANPPTGS DARDVQWVKP ERVAEIAFAE WTREGIVRQA VFQGLRDDKL ARNIVREQAK 

       550        560        570        580        590        600 
PPSAAARKET RAVNAAERKV RPGAERIADV DVTHPDRVIE KASGTTKADL ARYYAGVAEW 

       610        620        630        640        650        660 
MLPHLRNRPT SLVRAPDGID GERFFQKHSA ALKLQGITQL DPSLDPGHPS LLAINSAEAL 

       670        680        690        700        710        720 
VGAVQMGTVE FHTWNALADR IEQPDRIVFD IDPDPALPFA RVIEATQLML AMLDELGLKA 

       730        740        750        760        770        780 
FLKTSGGHGM HVVVLLTRRE AAGWDTLKTF AQAVVQHMAA TFPDRFVAKM GPQNRVGKIF 

       790        800        810        820        830        840 
IDYLRNNRGA STVAAYSVRA RTGLPVSVPI RHDELEGLQS SAQWTLRTLP ERLAKLKGDP 

       850        860 
WAAYAGTRQS VTADMRKRVG ADD 

« Hide

References

[1]"Complete sequence of chromosome 1 of Ralstonia pickettii 12J."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Meincke L., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Marsh T., Richardson P.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 12J.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001068 Genomic DNA. Translation: ACD25656.1.
RefSeqYP_001898088.1. NC_010682.1.

3D structure databases

ProteinModelPortalB2UGG9.
SMRB2UGG9. Positions 568-859.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING402626.Rpic_0501.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACD25656; ACD25656; Rpic_0501.
GeneID6288888.
KEGGrpi:Rpic_0501.
PATRIC20251880. VBIRalPic63053_1707.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMAHPLDYAD.
OrthoDBEOG661H49.
ProtClustDBCLSK2507327.

Enzyme and pathway databases

BioCycRPIC402626:GH94-502-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2UGG9_RALPJ
AccessionPrimary (citable) accession number: B2UGG9
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: April 16, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)