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B2UG80

- GCST_RALPJ

UniProt

B2UG80 - GCST_RALPJ

Protein

Aminomethyltransferase

Gene

gcvT

Organism
Ralstonia pickettii (strain 12J)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 41 (01 Oct 2014)
      Sequence version 1 (01 Jul 2008)
      Previous versions | rss
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    Functioni

    The glycine cleavage system catalyzes the degradation of glycine.UniRule annotation

    Catalytic activityi

    [Protein]-S(8)-aminomethyldihydrolipoyllysine + tetrahydrofolate = [protein]-dihydrolipoyllysine + 5,10-methylenetetrahydrofolate + NH3.UniRule annotation

    GO - Molecular functioni

    1. aminomethyltransferase activity Source: UniProtKB-EC
    2. transaminase activity Source: UniProtKB-KW

    GO - Biological processi

    1. glycine catabolic process Source: InterPro

    Keywords - Molecular functioni

    Aminotransferase, Transferase

    Enzyme and pathway databases

    BioCyciRPIC402626:GH94-3544-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    AminomethyltransferaseUniRule annotation (EC:2.1.2.10UniRule annotation)
    Alternative name(s):
    Glycine cleavage system T proteinUniRule annotation
    Gene namesi
    Name:gcvTUniRule annotation
    Ordered Locus Names:Rpic_3487
    OrganismiRalstonia pickettii (strain 12J)
    Taxonomic identifieri402626 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeRalstonia
    ProteomesiUP000002566: Chromosome 1

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 375375AminomethyltransferasePRO_1000114108Add
    BLAST

    Interactioni

    Subunit structurei

    The glycine cleavage system is composed of four proteins: P, T, L and H.UniRule annotation

    Protein-protein interaction databases

    STRINGi402626.Rpic_3487.

    Structurei

    3D structure databases

    ProteinModelPortaliB2UG80.
    SMRiB2UG80. Positions 5-373.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the GcvT family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0404.
    HOGENOMiHOG000239381.
    KOiK00605.
    OMAiPFFGVQS.
    OrthoDBiEOG6T1WS5.

    Family and domain databases

    Gene3Di2.40.30.110. 1 hit.
    3.30.1360.120. 2 hits.
    HAMAPiMF_00259. GcvT.
    InterProiIPR006223. GCS_T.
    IPR022903. GCS_T_bac.
    IPR028896. GCST/DmdA.
    IPR013977. GCV_T_C.
    IPR006222. GCV_T_N.
    IPR029043. GcvT/YgfZ_C.
    IPR027266. TrmE/GcvT_dom1.
    [Graphical view]
    PANTHERiPTHR13847:SF5. PTHR13847:SF5. 1 hit.
    PfamiPF01571. GCV_T. 1 hit.
    PF08669. GCV_T_C. 1 hit.
    [Graphical view]
    PIRSFiPIRSF006487. GcvT. 1 hit.
    SUPFAMiSSF101790. SSF101790. 1 hit.
    TIGRFAMsiTIGR00528. gcvT. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B2UG80-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTLQHTPLNA IHRSLGARMV DFGGWDMPVN YGSQIEEHHA VRQDAGVFDV    50
    SHMCVVDLTG ARVRDFLRGL LANNVDKLQT PGKALYSCML NPKGGVIDDL 100
    IVYFFREDWF RLVVNAGTAP TDLEWIVAQN AAAGTDVTIT PRRSDNNAGA 150
    EPLGILAVQG PNARAKTYAA LPGSQAVGDA LKPFNAGFVT VENVGEIMVA 200
    RTGYTGEDGF ELVVPAAQIA GVWERLLQAG VRPAGLGARD TLRLEAGMNL 250
    YGQDMDEHVS PLDAGLAWTV DLQSERDFTG KAALQAGGQR EQFVGLILRD 300
    KGGVLRAHQK VITAAGDGEI TSGTFSPSLS LSIALARLPK EVPVGTDVQV 350
    EIRDRKLTAT VVKLPFVRNG KALVS 375
    Length:375
    Mass (Da):40,148
    Last modified:July 1, 2008 - v1
    Checksum:i6E8CAE7C9F89D7CA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001068 Genomic DNA. Translation: ACD28607.1.
    RefSeqiYP_001901039.1. NC_010682.1.

    Genome annotation databases

    EnsemblBacteriaiACD28607; ACD28607; Rpic_3487.
    GeneIDi6286303.
    KEGGirpi:Rpic_3487.
    PATRICi20257813. VBIRalPic63053_4621.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001068 Genomic DNA. Translation: ACD28607.1 .
    RefSeqi YP_001901039.1. NC_010682.1.

    3D structure databases

    ProteinModelPortali B2UG80.
    SMRi B2UG80. Positions 5-373.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 402626.Rpic_3487.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACD28607 ; ACD28607 ; Rpic_3487 .
    GeneIDi 6286303.
    KEGGi rpi:Rpic_3487.
    PATRICi 20257813. VBIRalPic63053_4621.

    Phylogenomic databases

    eggNOGi COG0404.
    HOGENOMi HOG000239381.
    KOi K00605.
    OMAi PFFGVQS.
    OrthoDBi EOG6T1WS5.

    Enzyme and pathway databases

    BioCyci RPIC402626:GH94-3544-MONOMER.

    Family and domain databases

    Gene3Di 2.40.30.110. 1 hit.
    3.30.1360.120. 2 hits.
    HAMAPi MF_00259. GcvT.
    InterProi IPR006223. GCS_T.
    IPR022903. GCS_T_bac.
    IPR028896. GCST/DmdA.
    IPR013977. GCV_T_C.
    IPR006222. GCV_T_N.
    IPR029043. GcvT/YgfZ_C.
    IPR027266. TrmE/GcvT_dom1.
    [Graphical view ]
    PANTHERi PTHR13847:SF5. PTHR13847:SF5. 1 hit.
    Pfami PF01571. GCV_T. 1 hit.
    PF08669. GCV_T_C. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF006487. GcvT. 1 hit.
    SUPFAMi SSF101790. SSF101790. 1 hit.
    TIGRFAMsi TIGR00528. gcvT. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome 1 of Ralstonia pickettii 12J."
      Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Meincke L., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L.
      , Kyrpides N., Mikhailova N., Marsh T., Richardson P.
      Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 12J.

    Entry informationi

    Entry nameiGCST_RALPJ
    AccessioniPrimary (citable) accession number: B2UG80
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 24, 2009
    Last sequence update: July 1, 2008
    Last modified: October 1, 2014
    This is version 41 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3