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B2UFZ7 (B2UFZ7_RALPJ) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Transcriptional regulator, GntR family with aminotransferase domain EMBL ACD28524.1
Gene names
Ordered Locus Names:Rpic_3403 EMBL ACD28524.1
OrganismRalstonia pickettii (strain 12J) [Complete proteome] [HAMAP] EMBL ACD28524.1
Taxonomic identifier402626 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Ralstonia ›

Protein attributes

Sequence length489 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH gntR-type DNA-binding domain. SAAS SAAS000524 RuleBase RU000706

Sequences

Sequence LengthMass (Da)Tools
B2UFZ7 [UniParc].

Last modified July 1, 2008. Version 1.
Checksum: D8EA8242FD6E7456

FASTA48953,478
        10         20         30         40         50         60 
MDYGVLLSNY ERTAMHREGV ARASQQHRLY ACLRAAILSG QIEEGTRLAP SRTLAEELGI 

        70         80         90        100        110        120 
ARNSVLYAYE QLATEGFVLS RRQGTVVARV GLQQTPAQAP EAAPALSHRV KDLERPRGDM 

       130        140        150        160        170        180 
DDLLPFLPGT PALDEFPLAQ WRRCMERGWR RIGPGQMGYG PVEGNVALRQ AVAEYLRVSR 

       190        200        210        220        230        240 
GVRCDATQVF ITDGTQNSLD MCARTLADAG DTAWIENPGY YGARAALQAA DMRLVPISVD 

       250        260        270        280        290        300 
ADGLAPREED WRDTPPKLIY ITPSHQYPLG AVMSLERRLA LIQHARAAGA WIIEDDYDSE 

       310        320        330        340        350        360 
FRHTGAPLSA VQGLTENAPV IYLGTFSKML FPALRLGYMV VPPALVPALK KTAGALMLRG 

       370        380        390        400        410        420 
RVAEQLALAE FIEAGHFTRH LRRMRRLYGE RRDALQAAIE RHLDGIVTVS GGAGGMHLSA 

       430        440        450        460        470        480 
RLDAPVPDTE VSRAARAHGM VLRPLSRFCL PGTLTAQYNG LVLGYGNVPA EAMDGLALRI 


RDVIESVAG

« Hide

References

[1]"Complete sequence of chromosome 1 of Ralstonia pickettii 12J."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Meincke L., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Marsh T., Richardson P.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 12J.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001068 Genomic DNA. Translation: ACD28524.1.
RefSeqYP_001900956.1. NC_010682.1.

3D structure databases

ProteinModelPortalB2UFZ7.
ModBaseSearch...

Protein-protein interaction databases

STRING402626.Rpic_3403.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACD28524; ACD28524; Rpic_3403.
GeneID6289644.
KEGGrpi:Rpic_3403.
PATRIC20257641. VBIRalPic63053_4536.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1167.
HOGENOMHOG000223052.
KOK00375.
OMAGMAPTDE.
ProtClustDBCLSK630340.

Enzyme and pathway databases

BioCycRPIC402626:GH94-3459-MONOMER.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
3.40.640.10. 1 hit.
InterProIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR000524. Tscrpt_reg_HTH_GntR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF00155. Aminotran_1_2. 1 hit.
PF00392. GntR. 1 hit.
[Graphical view]
SMARTSM00345. HTH_GNTR. 1 hit.
[Graphical view]
SUPFAMSSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITEPS50949. HTH_GNTR. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2UFZ7_RALPJ
AccessionPrimary (citable) accession number: B2UFZ7
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: May 29, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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