B2UFV3 (B2UFV3_RALPJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Pseudouridine synthase RuleBase RU003886
EC=5.4.99.- RuleBase RU003886

Gene names

Ordered Locus Names:

Rpic_1919 EMBL ACD27054.1

Organism

Ralstonia pickettii (strain 12J) [Complete proteome] [HAMAP] EMBL ACD27054.1

Taxonomic identifier

402626 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Ralstonia › Burkholderia pickettii

Protein attributes

Sequence length	370 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pseudouridine synthase rluA family. RuleBase RU004243

Ontologies

Keywords
Molecular function	Glycosidase EMBL ACD27054.1 Hydrolase Isomerase RuleBase RU003886
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	pseudouridine synthesis Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro hydrolase activity, acting on glycosyl bonds Inferred from electronic annotation. Source: UniProtKB-KW pseudouridine synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B2UFV3 [UniParc]. Last modified July 1, 2008. Version 1. Checksum: 9C54031D3F6F67BE	FASTA	370	40,493
	10 20 30 40 50 60 MKNRIKHYSP SPVSDDALAD VSLTAPETED ALDDEALDLP AAGAGQAAEP IIIEIPETMH 70 80 90 100 110 120 GERLDKALAK LLPDYSRSRL QQWIDAGAVR LRGEVVRPRA AISGGDRIEV VPQRAADENA 130 140 150 160 170 180 FVAEPIDLDV VYEDDTLLVI NKPAGLVVHP AAGNWSGTVL NGLLHRYPDA VELPRAGIVH 190 200 210 220 230 240 RLDKDTSGLM VVARTLPAQT DLVRQLQART VKRTYLALVW GETPEEATID APIGRDPRDR 250 260 270 280 290 300 TRMAIIETAS GKPARTHFKT LDVVDLGRAQ VSLVRCQLET GRTHQIRVHF ESEGHPLLGD 310 320 330 340 350 360 PVYTRNFRRG QPQTIKAQLP VPFTRQALHA VRLGLVHPAS GKSVHWEAGV PDDFADLLEA 370 LDLDPDADVN

References

[1]

"Complete sequence of chromosome 1 of Ralstonia pickettii 12J." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Meincke L., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Mikhailova N., Marsh T., Richardson P. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 12J.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001068 Genomic DNA. Translation: ACD27054.1.
RefSeq	YP_001899486.1. NC_010682.1.
3D structure databases
ProteinModelPortal	B2UFV3.
ModBase	Search...
Protein-protein interaction databases
STRING	402626.Rpic_1919.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACD27054; ACD27054; Rpic_1919.
GeneID	6289866.
KEGG	rpi:Rpic_1919.
PATRIC	20254642. VBIRalPic63053_3071.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0564.
HOGENOM	HOG000275919.
KO	K06180.
OMA	CAHIGHP.
ProtClustDB	CLSK2753610.
Enzyme and pathway databases
BioCyc	RPIC402626:GH94-2031-MONOMER.
Family and domain databases
Gene3D	3.10.290.10. 1 hit.
InterPro	IPR020103. PsdUridine_synth_cat_dom. IPR006225. PsdUridine_synth_RluC/D. IPR006224. PsdUridine_synth_RluC/D_CS. IPR006145. PsdUridine_synth_RsuA/RluD. IPR002942. S4_RNA-bd. [Graphical view]
Pfam	PF00849. PseudoU_synth_2. 1 hit. PF01479. S4. 1 hit. [Graphical view]
SMART	SM00363. S4. 1 hit. [Graphical view]
SUPFAM	SSF55120. PsdUridine_synth_cat_dom. 1 hit.
TIGRFAMs	TIGR00005. rluA_subfam. 1 hit.
PROSITE	PS01129. PSI_RLU. 1 hit. PS50889. S4. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B2UFV3_RALPJ

Accession

Primary (citable) accession number: B2UFV3

Entry history

Integrated into UniProtKB/TrEMBL:	July 1, 2008
Last sequence update:	July 1, 2008
Last modified:	May 1, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)