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B2UFV3

- B2UFV3_RALPJ

UniProt

B2UFV3 - B2UFV3_RALPJ

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Protein

Pseudouridine synthase

Gene

Rpic_1919

Organism
Ralstonia pickettii (strain 12J)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. hydrolase activity, acting on glycosyl bonds Source: UniProtKB-KW
  2. pseudouridine synthase activity Source: InterPro
  3. RNA binding Source: InterPro

GO - Biological processi

  1. pseudouridine synthesis Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase, IsomeraseUniRule annotation

Enzyme and pathway databases

BioCyciRPIC402626:GH94-1941-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
Gene namesi
Ordered Locus Names:Rpic_1919Imported
OrganismiRalstonia pickettii (strain 12J)Imported
Taxonomic identifieri402626 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeRalstonia
ProteomesiUP000002566: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi402626.Rpic_1919.

Structurei

3D structure databases

ProteinModelPortaliB2UFV3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the pseudouridine synthase rluA family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0564.
HOGENOMiHOG000275919.
KOiK06180.
OMAiRDIVHGG.
OrthoDBiEOG6P070X.

Family and domain databases

Gene3Di3.10.290.10. 1 hit.
InterProiIPR020103. PsdUridine_synth_cat_dom.
IPR006225. PsdUridine_synth_RluC/D.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
IPR002942. S4_RNA-bd.
[Graphical view]
PfamiPF00849. PseudoU_synth_2. 1 hit.
PF01479. S4. 1 hit.
[Graphical view]
SMARTiSM00363. S4. 1 hit.
[Graphical view]
SUPFAMiSSF55120. SSF55120. 1 hit.
TIGRFAMsiTIGR00005. rluA_subfam. 1 hit.
PROSITEiPS01129. PSI_RLU. 1 hit.
PS50889. S4. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B2UFV3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKNRIKHYSP SPVSDDALAD VSLTAPETED ALDDEALDLP AAGAGQAAEP
60 70 80 90 100
IIIEIPETMH GERLDKALAK LLPDYSRSRL QQWIDAGAVR LRGEVVRPRA
110 120 130 140 150
AISGGDRIEV VPQRAADENA FVAEPIDLDV VYEDDTLLVI NKPAGLVVHP
160 170 180 190 200
AAGNWSGTVL NGLLHRYPDA VELPRAGIVH RLDKDTSGLM VVARTLPAQT
210 220 230 240 250
DLVRQLQART VKRTYLALVW GETPEEATID APIGRDPRDR TRMAIIETAS
260 270 280 290 300
GKPARTHFKT LDVVDLGRAQ VSLVRCQLET GRTHQIRVHF ESEGHPLLGD
310 320 330 340 350
PVYTRNFRRG QPQTIKAQLP VPFTRQALHA VRLGLVHPAS GKSVHWEAGV
360 370
PDDFADLLEA LDLDPDADVN
Length:370
Mass (Da):40,493
Last modified:July 1, 2008 - v1
Checksum:i9C54031D3F6F67BE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001068 Genomic DNA. Translation: ACD27054.1.
RefSeqiYP_001899486.1. NC_010682.1.

Genome annotation databases

EnsemblBacteriaiACD27054; ACD27054; Rpic_1919.
GeneIDi6289866.
KEGGirpi:Rpic_1919.
PATRICi20254642. VBIRalPic63053_3071.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001068 Genomic DNA. Translation: ACD27054.1 .
RefSeqi YP_001899486.1. NC_010682.1.

3D structure databases

ProteinModelPortali B2UFV3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 402626.Rpic_1919.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACD27054 ; ACD27054 ; Rpic_1919 .
GeneIDi 6289866.
KEGGi rpi:Rpic_1919.
PATRICi 20254642. VBIRalPic63053_3071.

Phylogenomic databases

eggNOGi COG0564.
HOGENOMi HOG000275919.
KOi K06180.
OMAi RDIVHGG.
OrthoDBi EOG6P070X.

Enzyme and pathway databases

BioCyci RPIC402626:GH94-1941-MONOMER.

Family and domain databases

Gene3Di 3.10.290.10. 1 hit.
InterProi IPR020103. PsdUridine_synth_cat_dom.
IPR006225. PsdUridine_synth_RluC/D.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
IPR002942. S4_RNA-bd.
[Graphical view ]
Pfami PF00849. PseudoU_synth_2. 1 hit.
PF01479. S4. 1 hit.
[Graphical view ]
SMARTi SM00363. S4. 1 hit.
[Graphical view ]
SUPFAMi SSF55120. SSF55120. 1 hit.
TIGRFAMsi TIGR00005. rluA_subfam. 1 hit.
PROSITEi PS01129. PSI_RLU. 1 hit.
PS50889. S4. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome 1 of Ralstonia pickettii 12J."
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Meincke L., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L.
    , Kyrpides N., Mikhailova N., Marsh T., Richardson P.
    Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 12JImported.

Entry informationi

Entry nameiB2UFV3_RALPJ
AccessioniPrimary (citable) accession number: B2UFV3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: October 1, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3