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B2U9V0 (B2U9V0_RALPJ) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Histidine--tRNA ligase HAMAP-Rule MF_00127
EC=6.1.1.21 HAMAP-Rule MF_00127
Alternative name(s):
Histidyl-tRNA synthetase HAMAP-Rule MF_00127
Gene names
Name:hisS HAMAP-Rule MF_00127
Ordered Locus Names:Rpic_1060 EMBL ACD26208.1
OrganismRalstonia pickettii (strain 12J) [Complete proteome] [HAMAP] EMBL ACD26208.1
Taxonomic identifier402626 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Ralstonia ›

Protein attributes

Sequence length450 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-histidine + tRNA(His) = AMP + diphosphate + L-histidyl-tRNA(His). HAMAP-Rule MF_00127 SAAS SAAS015807

Subunit structure

Homodimer By similarity. HAMAP-Rule MF_00127

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00127.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP-Rule MF_00127 RuleBase RU003746

Sequences

Sequence LengthMass (Da)Tools
B2U9V0 [UniParc].

Last modified July 1, 2008. Version 1.
Checksum: B48440909AF8E787

FASTA45050,108
        10         20         30         40         50         60 
MREVGFQRDI MSDTQKQRVQ KIAGVKGMND LLPADAPLWE HFDNAVRSML RAYGYQQIRT 

        70         80         90        100        110        120 
PIVEQTQLFV RGIGEVTDIV EKEMYTFTDA LNGEQLTMRP EGTAAAVRAV IEHNLLYDGP 

       130        140        150        160        170        180 
KRLWYTGPMF RHERPQRGRY RQFHQVGVEA LGFAGPDIDA EVILMCQRLW DDLGLVGLKL 

       190        200        210        220        230        240 
ELNSLGQAEE RAAHRADLIK YLEGFQDVLD EDGKRRLYTN PLRVLDTKNP ALQDMAAGAP 

       250        260        270        280        290        300 
KLLDYLGDES RAHFEGVQKL LKANNIPFII NPRLVRGLDY YNLTVFEWTT DKLGAQGTVA 

       310        320        330        340        350        360 
GGGRYDPLIE QIGGKPAPAC GWAMGVERII ELLREEKLEP EAQGCDVYIV HQGDEAQVQA 

       370        380        390        400        410        420 
LIAAERLRDA GLDVILHASP EGRNGSFKSQ FKRADASGAS YAVIIGDDEV TQGVAQIKPL 

       430        440        450 
RGDPTADAQQ TVPSDQLVDR LIDAMVANND

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References

[1]"Complete sequence of chromosome 1 of Ralstonia pickettii 12J."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Meincke L., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Marsh T., Richardson P.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 12J.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001068 Genomic DNA. Translation: ACD26208.1.
RefSeqYP_001898640.1. NC_010682.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING402626.Rpic_1060.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACD26208; ACD26208; Rpic_1060.
GeneID6288152.
KEGGrpi:Rpic_1060.
PATRIC20253020. VBIRalPic63053_2264.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0124.
HOGENOMHOG000018072.
KOK01892.
OMACGGGNFK.
ProtClustDBPRK00037.

Enzyme and pathway databases

BioCycRPIC402626:GH94-1168-MONOMER.

Family and domain databases

Gene3D3.40.50.800. 1 hit.
HAMAPMF_00127. His_tRNA_synth.
InterProIPR006195. aa-tRNA-synth_II.
IPR004154. Anticodon-bd.
IPR015807. His-tRNA-ligase.
IPR004516. HisRS/HisZ.
[Graphical view]
PANTHERPTHR11476. PTHR11476. 1 hit.
PfamPF03129. HGTP_anticodon. 1 hit.
[Graphical view]
PIRSFPIRSF001549. His-tRNA_synth. 1 hit.
SUPFAMSSF52954. Anticodon_bd. 1 hit.
TIGRFAMsTIGR00442. hisS. 1 hit.
PROSITEPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2U9V0_RALPJ
AccessionPrimary (citable) accession number: B2U9V0
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: May 1, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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