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Protein
Submitted name:

Alpha-amylase, periplasmic

Gene

malS

Organism
Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseImported, Hydrolase

Protein family/group databases

CAZyiGH13 Glycoside Hydrolase Family 13

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylase, periplasmicImported (EC:3.2.1.1Imported)
Gene namesi
Name:malSImported
Ordered Locus Names:SbBS512_E3951Imported
OrganismiShigella boydii serotype 18 (strain CDC 3083-94 / BS512)Imported
Taxonomic identifieri344609 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeShigella
Proteomesi
  • UP000001030 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 17Sequence analysisAdd BLAST17
ChainiPRO_500278120718 – 676Sequence analysisAdd BLAST659

Structurei

3D structure databases

ProteinModelPortaliB2U552
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini193 – 637AamyInterPro annotationAdd BLAST445

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

HOGENOMiHOG000273912
KOiK01176
OMAiDKVMVVW

Family and domain databases

InterProiView protein in InterPro
IPR014635 A_amylase_MalS
IPR006047 Glyco_hydro_13_cat_dom
IPR017853 Glycoside_hydrolase_SF
PfamiView protein in Pfam
PF00128 Alpha-amylase, 1 hit
PIRSFiPIRSF036917 Alph_amls_MalS, 1 hit
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SUPFAMiSSF51445 SSF51445, 2 hits

Sequencei

Sequence statusi: Complete.

B2U552-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLASCFLTL LPGFAVAASW TSPGFPVFSE QGTGTFVSHA QLPKGTRPLT
60 70 80 90 100
LNFDQQCWQP ADAIKLNQML SLQPCSNTPP QWRLFRDGKY TLQIDTRSGT
110 120 130 140 150
PTLMISIQNA AEAVANLVRE CPKWDGLPLT LDVSATFPEG AAVRDYYSQQ
160 170 180 190 200
IAIVKNGQIT LQPAATSNGL LLLERAETDT SAPFDWHNAT VYFVLTDRFE
210 220 230 240 250
NGDPSNDQSY GRHKDGMAEI GTFHGGDLRA LINKLDYLQQ LGVNALWISA
260 270 280 290 300
PFEQIHGWVG GGTKGDFPHY AYHGYYTQDW TNLDANMGNE ADLRTLVDSA
310 320 330 340 350
HQRGIRILFD VVMNHTGYAT LADMQEYQFG ALYLSGDEVK KTLGERWSDW
360 370 380 390 400
KPAAGQTWHS FNDYINFSDK TGWDKWWGKN WIRTDIGDYD NPGFDDLTMS
410 420 430 440 450
LAFLPDIKTE STTASGLPVF YKNKTDTHAK VIEGFTPRDY LTHWLSQWVR
460 470 480 490 500
DYGIDGFRVD TAKHVELPAW QQLKTEASSA LREWKKTNPD KALDDKPFWM
510 520 530 540 550
TGEAWGHGVM QSDYYRHGFD AMINFDYQEQ AAKAVDCLAQ MDTTWQQMAE
560 570 580 590 600
KLQGFNVLSY LSSHDTRLFR EGGDKAAELL LLAPGAVQIF YGDESSRPFG
610 620 630 640 650
PTGSDPLQGT RSDMNWQDVS GKSAANVAHW QKISQFRARH PAIGAGKQTT
660 670
LSLKQGYGFV REHGDDKVLV IWAGQQ
Length:676
Mass (Da):75,838
Last modified:July 1, 2008 - v1
Checksum:i63A89F1F5BA63776
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001063 Genomic DNA Translation: ACD10383.1

Genome annotation databases

EnsemblBacteriaiACD10383; ACD10383; SbBS512_E3951
KEGGisbc:SbBS512_E3951

Similar proteinsi

Entry informationi

Entry nameiB2U552_SHIB3
AccessioniPrimary (citable) accession number: B2U552
Entry historyiIntegrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: March 28, 2018
This is version 57 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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