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B2U552 (B2U552_SHIB3) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.1 EMBL ACD10383.1
Gene names
Name:malS EMBL ACD10383.1
Ordered Locus Names:SbBS512_E3951 EMBL ACD10383.1
OrganismShigella boydii serotype 18 (strain CDC 3083-94 / BS512) [Complete proteome] [HAMAP] EMBL ACD10383.1
Taxonomic identifier344609 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeShigella

Protein attributes

Sequence length676 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B2U552 [UniParc].

Last modified July 1, 2008. Version 1.
Checksum: 63A89F1F5BA63776

FASTA67675,838
        10         20         30         40         50         60 
MKLASCFLTL LPGFAVAASW TSPGFPVFSE QGTGTFVSHA QLPKGTRPLT LNFDQQCWQP 

        70         80         90        100        110        120 
ADAIKLNQML SLQPCSNTPP QWRLFRDGKY TLQIDTRSGT PTLMISIQNA AEAVANLVRE 

       130        140        150        160        170        180 
CPKWDGLPLT LDVSATFPEG AAVRDYYSQQ IAIVKNGQIT LQPAATSNGL LLLERAETDT 

       190        200        210        220        230        240 
SAPFDWHNAT VYFVLTDRFE NGDPSNDQSY GRHKDGMAEI GTFHGGDLRA LINKLDYLQQ 

       250        260        270        280        290        300 
LGVNALWISA PFEQIHGWVG GGTKGDFPHY AYHGYYTQDW TNLDANMGNE ADLRTLVDSA 

       310        320        330        340        350        360 
HQRGIRILFD VVMNHTGYAT LADMQEYQFG ALYLSGDEVK KTLGERWSDW KPAAGQTWHS 

       370        380        390        400        410        420 
FNDYINFSDK TGWDKWWGKN WIRTDIGDYD NPGFDDLTMS LAFLPDIKTE STTASGLPVF 

       430        440        450        460        470        480 
YKNKTDTHAK VIEGFTPRDY LTHWLSQWVR DYGIDGFRVD TAKHVELPAW QQLKTEASSA 

       490        500        510        520        530        540 
LREWKKTNPD KALDDKPFWM TGEAWGHGVM QSDYYRHGFD AMINFDYQEQ AAKAVDCLAQ 

       550        560        570        580        590        600 
MDTTWQQMAE KLQGFNVLSY LSSHDTRLFR EGGDKAAELL LLAPGAVQIF YGDESSRPFG 

       610        620        630        640        650        660 
PTGSDPLQGT RSDMNWQDVS GKSAANVAHW QKISQFRARH PAIGAGKQTT LSLKQGYGFV 

       670 
REHGDDKVLV IWAGQQ 

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References

[1]"Complete sequence of Shigella boydii serotype 18 strain BS512."
Rasko D.A., Rosovitz M., Maurelli A.T., Myers G., Seshadri R., Cer R., Jiang L., Ravel J., Sebastian Y.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CDC 3083-94 / BS512.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001063 Genomic DNA. Translation: ACD10383.1.
RefSeqYP_001882233.1. NC_010658.1.

3D structure databases

ProteinModelPortalB2U552.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING344609.SbBS512_E3951.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACD10383; ACD10383; SbBS512_E3951.
GeneID6270624.
KEGGsbc:SbBS512_E3951.
PATRIC18675233. VBIShiBoy129590_4333.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000273912.
KOK01176.
OMAGQNWHSF.
OrthoDBEOG65QWH3.

Enzyme and pathway databases

BioCycSBOY344609:GI0O-3952-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameB2U552_SHIB3
AccessionPrimary (citable) accession number: B2U552
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: May 14, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)