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B2U552

- B2U552_SHIB3

UniProt

B2U552 - B2U552_SHIB3

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Protein
Submitted name:

Alpha-amylase, periplasmic

Gene
malS, SbBS512_E3951
Organism
Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciSBOY344609:GI0O-3952-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylase, periplasmicImported (EC:3.2.1.1Imported)
Gene namesi
Name:malSImported
Ordered Locus Names:SbBS512_E3951Imported
OrganismiShigella boydii serotype 18 (strain CDC 3083-94 / BS512)Imported
Taxonomic identifieri344609 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeShigella
ProteomesiUP000001030: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi344609.SbBS512_E3951.

Structurei

3D structure databases

ProteinModelPortaliB2U552.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000273912.
KOiK01176.
OMAiGQNWHSF.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

B2U552-1 [UniParc]FASTAAdd to Basket

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MKLASCFLTL LPGFAVAASW TSPGFPVFSE QGTGTFVSHA QLPKGTRPLT    50
LNFDQQCWQP ADAIKLNQML SLQPCSNTPP QWRLFRDGKY TLQIDTRSGT 100
PTLMISIQNA AEAVANLVRE CPKWDGLPLT LDVSATFPEG AAVRDYYSQQ 150
IAIVKNGQIT LQPAATSNGL LLLERAETDT SAPFDWHNAT VYFVLTDRFE 200
NGDPSNDQSY GRHKDGMAEI GTFHGGDLRA LINKLDYLQQ LGVNALWISA 250
PFEQIHGWVG GGTKGDFPHY AYHGYYTQDW TNLDANMGNE ADLRTLVDSA 300
HQRGIRILFD VVMNHTGYAT LADMQEYQFG ALYLSGDEVK KTLGERWSDW 350
KPAAGQTWHS FNDYINFSDK TGWDKWWGKN WIRTDIGDYD NPGFDDLTMS 400
LAFLPDIKTE STTASGLPVF YKNKTDTHAK VIEGFTPRDY LTHWLSQWVR 450
DYGIDGFRVD TAKHVELPAW QQLKTEASSA LREWKKTNPD KALDDKPFWM 500
TGEAWGHGVM QSDYYRHGFD AMINFDYQEQ AAKAVDCLAQ MDTTWQQMAE 550
KLQGFNVLSY LSSHDTRLFR EGGDKAAELL LLAPGAVQIF YGDESSRPFG 600
PTGSDPLQGT RSDMNWQDVS GKSAANVAHW QKISQFRARH PAIGAGKQTT 650
LSLKQGYGFV REHGDDKVLV IWAGQQ 676
Length:676
Mass (Da):75,838
Last modified:July 1, 2008 - v1
Checksum:i63A89F1F5BA63776
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001063 Genomic DNA. Translation: ACD10383.1.
RefSeqiYP_001882233.1. NC_010658.1.

Genome annotation databases

EnsemblBacteriaiACD10383; ACD10383; SbBS512_E3951.
GeneIDi6270624.
KEGGisbc:SbBS512_E3951.
PATRICi18675233. VBIShiBoy129590_4333.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001063 Genomic DNA. Translation: ACD10383.1 .
RefSeqi YP_001882233.1. NC_010658.1.

3D structure databases

ProteinModelPortali B2U552.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 344609.SbBS512_E3951.

Protein family/group databases

CAZyi GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACD10383 ; ACD10383 ; SbBS512_E3951 .
GeneIDi 6270624.
KEGGi sbc:SbBS512_E3951.
PATRICi 18675233. VBIShiBoy129590_4333.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000273912.
KOi K01176.
OMAi GQNWHSF.
OrthoDBi EOG65QWH3.

Enzyme and pathway databases

BioCyci SBOY344609:GI0O-3952-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Shigella boydii serotype 18 strain BS512."
    Rasko D.A., Rosovitz M., Maurelli A.T., Myers G., Seshadri R., Cer R., Jiang L., Ravel J., Sebastian Y.
    Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CDC 3083-94 / BS512.

Entry informationi

Entry nameiB2U552_SHIB3
AccessioniPrimary (citable) accession number: B2U552
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: May 14, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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