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B2TZQ2 (RSMC_SHIB3) Reviewed, UniProtKB/Swiss-Prot

Last modified May 29, 2013. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribosomal RNA small subunit methyltransferase C
EC=2.1.1.172
Alternative name(s):
16S rRNA m2G1207 methyltransferase
rRNA (guanine-N(2)-)-methyltransferase RsmC
Gene names
Name:rsmC
Ordered Locus Names:SbBS512_E4914
OrganismShigella boydii serotype 18 (strain CDC 3083-94 / BS512) [Complete proteome] [HAMAP]
Taxonomic identifier344609 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Shigella ›

Protein attributes

Sequence length343 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle By similarity. HAMAP-Rule MF_01862

Catalytic activity

S-adenosyl-L-methionine + guanine(1207) in 16S rRNA = S-adenosyl-L-homocysteine + N(2)-methylguanine(1207) in 16S rRNA. HAMAP-Rule MF_01862

Subunit structure

Monomer By similarity. HAMAP-Rule MF_01862

Subcellular location

Cytoplasm Potential HAMAP-Rule MF_01862.

Sequence similarities

Belongs to the methyltransferase superfamily. RsmC family.

Ontologies

Keywords
   Biological processrRNA processing
   Cellular componentCytoplasm
   LigandS-adenosyl-L-methionine
   Molecular functionMethyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processrRNA methylation

Inferred from electronic annotation. Source: GOC

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_function16S rRNA (guanine(1207)-N(2))-methyltransferase activity

Inferred from electronic annotation. Source: EC

nucleic acid binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 343343Ribosomal RNA small subunit methyltransferase C HAMAP-Rule MF_01862
PRO_0000369784

Sequences

Sequence LengthMass (Da)Tools
B2TZQ2 [UniParc].

Last modified July 1, 2008. Version 1.
Checksum: B4803E7FE40DE85C

FASTA34337,616
        10         20         30         40         50         60 
MSAFTPASEV LLRHSDDFEQ SRILFAGDLQ DDLPARLDTA ASRAHTQQFH HGQVLSRQMG 

        70         80         90        100        110        120 
DNARFSLVAT VDDVADCDTL IYYWPKNKPE AQFQLMNLLS LLPVGTDIFV VGENRSGVRS 

       130        140        150        160        170        180 
AEQMLADYAP LNKVDSARRC GLYFGRLEKQ PVFDADKFWG EYSVDGLTVK TLPGVFSRDG 

       190        200        210        220        230        240 
LDVGSQLLLS TLTPHTKGKV LDVGCGAGVL SVAFARHSPK IRLTLCDVSA PAVEASRATL 

       250        260        270        280        290        300 
AANYVEGEVF ASNVFSEVKG RFDMIISNPP FHDGMQTSLD AAQTLIRGAV RHLNSGGELR 

       310        320        330        340 
IVANAFLPYP DVLDETFGFH EVIAQTGRFK VYRAIMTRQA KKG

« Hide

References

[1]"Complete sequence of Shigella boydii serotype 18 strain BS512."
Rasko D.A., Rosovitz M., Maurelli A.T., Myers G., Seshadri R., Cer R., Jiang L., Ravel J., Sebastian Y.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CDC 3083-94 / BS512.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001063 Genomic DNA. Translation: ACD06429.1.
RefSeqYP_001883033.1. NC_010658.1.

3D structure databases

ProteinModelPortalB2TZQ2.
ModBaseSearch...

Protein-protein interaction databases

STRING344609.SbBS512_E4914.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACD06429; ACD06429; SbBS512_E4914.
GeneID6270187.
KEGGsbc:SbBS512_E4914.
PATRIC18677377. VBIShiBoy129590_5363.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2813.
HOGENOMHOG000218308.
KOK00564.
OMARHCQLWQ.
ProtClustDBPRK09489.

Enzyme and pathway databases

BioCycSBOY344609:GI0O-4905-MONOMER.

Family and domain databases

HAMAPMF_01862. 16SrRNA_methyltr_C.
InterProIPR002052. DNA_methylase_N6_adenine_CS.
IPR013675. Mtase_sm_N.
IPR023543. rRNA_ssu_MeTfrase_C.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamPF05175. MTS. 1 hit.
PF08468. MTS_N. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRSMC_SHIB3
AccessionPrimary (citable) accession number: B2TZQ2
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: July 1, 2008
Last modified: May 29, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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