B2TYE1 (B2TYE1_SHIB3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
dTDP-glucose 4,6-dehydratase RuleBase RU004473
EC=4.2.1.46 RuleBase RU004473

Gene names

Name:	rfbB2 EMBL ACD06531.1
Ordered Locus Names:	SbBS512_E1192 EMBL ACD06531.1

Organism

Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) [Complete proteome] [HAMAP] EMBL ACD06531.1

Taxonomic identifier

344609 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Shigella › Shigella boydii

Protein attributes

Sequence length	361 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	dTDP-alpha-D-glucose = dTDP-4-dehydro-6-deoxy-alpha-D-glucose + H2O. RuleBase RU004473
Cofactor	NAD By similarity. RuleBase RU004473
Sequence similarities	Belongs to the sugar epimerase family. dTDP-glucose dehydratase subfamily. RuleBase RU004473

Ontologies

Keywords
Molecular function	Lyase RuleBase RU004473 EMBL ACD06531.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	nucleotide-sugar metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	coenzyme binding Inferred from electronic annotation. Source: InterPro dTDP-glucose 4,6-dehydratase activity Inferred from electronic annotation. Source: EC nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B2TYE1 [UniParc]. Last modified July 1, 2008. Version 1. Checksum: 60BE896BAE0E83FE	FASTA	361	40,572
	10 20 30 40 50 60 MKILVTGGAG FIGSAVVRHI INNRQDSVVN VDKLTYAGNL ESLADVSDSE RYVFEHADIC 70 80 90 100 110 120 DAAAMARIFA QHQPDAVMHL AAESHVDRSI TGPAAFIETN IVGTYVLLEA ARNYWSALDS 130 140 150 160 170 180 DKKNSFRFHH ISTDEVYGDL PHPDEVNIKE GLPLFTETTA YAPSSPYSAS KASSDHLVRA 190 200 210 220 230 240 WKRTYGLPTI VTNCSNNYGP YHFPEKLIPL VILNALEGKG LPIYGKGDQI RDWLYVEDHA 250 260 270 280 290 300 RALYTVVTEG KAGETYNIGG HNEKKNIDVV LTICDLLDEI VPKEKSYREQ ITYVTDRPGH 310 320 330 340 350 360 DRRYAIDAEK IGRELGWKPQ ETFESGIRKT VEWYLSNTKW VDNVKSGAYQ SWIEQNYEGR Q

References

[1]

"Complete sequence of Shigella boydii serotype 18 strain BS512." Rasko D.A., Rosovitz M., Maurelli A.T., Myers G., Seshadri R., Cer R., Jiang L., Ravel J., Sebastian Y. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CDC 3083-94 / BS512.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001063 Genomic DNA. Translation: ACD06531.1.
RefSeq	YP_001879838.1. NC_010658.1.
3D structure databases
ProteinModelPortal	B2TYE1.
ModBase	Search...
Protein-protein interaction databases
STRING	344609.SbBS512_E1192.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACD06531; ACD06531; SbBS512_E1192.
GeneID	6272489.
KEGG	sbc:SbBS512_E1192.
PATRIC	18669051. VBIShiBoy129590_1314.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1088.
HOGENOM	HOG000168006.
KO	K01710.
OMA	AKKAFRF.
ProtClustDB	PRK10084.
Enzyme and pathway databases
BioCyc	SBOY344609:GI0O-613-MONOMER.
Family and domain databases
Gene3D	3.40.50.720. 1 hit.
InterPro	IPR005888. dTDP_Gluc_deHydtase. IPR001509. Epimerase_deHydtase. IPR016040. NAD(P)-bd_dom. [Graphical view]
PANTHER	PTHR10366:SF41. PTHR10366:SF41. 1 hit.
Pfam	PF01370. Epimerase. 1 hit. [Graphical view]
TIGRFAMs	TIGR01181. dTDP_gluc_dehyt. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B2TYE1_SHIB3

Accession

Primary (citable) accession number: B2TYE1

Entry history

Integrated into UniProtKB/TrEMBL:	July 1, 2008
Last sequence update:	July 1, 2008
Last modified:	May 1, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)