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B2TR26 (B2TR26_CLOBB) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.1 EMBL ACD21882.1
EC=3.2.1.41 EMBL ACD21882.1
Gene names
Ordered Locus Names:CLL_A3414
OrganismClostridium botulinum (strain Eklund 17B / Type B) [Complete proteome] [HAMAP]
Taxonomic identifier508765 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length604 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B2TR26 [UniParc].

Last modified July 1, 2008. Version 1.
Checksum: 11708871CBAEF496

FASTA60470,758
        10         20         30         40         50         60 
MDEIKVIYNS RDKNFKKPFG AVEIGQVIKL SIIVNKDLLV ALELTDFNNE NSLLEMQKEY 

        70         80         90        100        110        120 
LNDGNYKYSV EIDTSNKSGL LRYYFILIDG YKRIYYGNND ERLGGEGQVY NNDPLPYEVT 

       130        140        150        160        170        180 
VYEKIEVPKW YKDGVIYQIF VDRFCNGNED NSINKPKKNS FLYATWDDDP MYIKDNMGRI 

       190        200        210        220        230        240 
LRWDFYGGNL KGIIKKLDYI KSLGANIIYL SPIFKSSSCH KYDVGDYEII DEMFGTNEEF 

       250        260        270        280        290        300 
SKLCNIAHSK GIRIILDGVF SNTGSDSRYF NKYGNYDEVG AYQSPNSKYY NWYKFITYPY 

       310        320        330        340        350        360 
QYESWWGIDN RPNVNELEES YLDYIINKKG SIIEKWMNLG ASGWRLNVAD ELPDKFIEIF 

       370        380        390        400        410        420 
KKRMKEINND SVLIGEVWED ASNKISYSKR RKYLFGKELD SVTNYPLREY LINFVKGYIT 

       430        440        450        460        470        480 
SEKLKKRIMS LYENYPREIF NSNMNVIGTH DTERILTILD GNLYLLKLII VFQMTLPGVP 

       490        500        510        520        530        540 
VIYYGDEAGL NGGKDPENRK AYPWNNENQE ILKFYSKIIN IRKKEEVLRK GNLKIFDMDV 

       550        560        570        580        590        600 
NICVLKRTYE GKNIIVVLNN SGLHKNLNKF EFEGVYSELF SNKTIDFDKA DINLSPYNFL 


ILSK 

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References

[1]"Complete sequence of Clostridium botulinum strain Eklund."
Brinkac L.M., Brown J.L., Bruce D., Detter C., Munk C., Smith L.A., Smith T.J., Sutton G., Brettin T.S.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001056 Genomic DNA. Translation: ACD21882.1.
RefSeqYP_001887592.1. NC_010674.1.

3D structure databases

ProteinModelPortalB2TR26.
ModBaseSearch...

Protein-protein interaction databases

STRINGB2TR26.

Protein family/group databases

CAZyCBM34. Carbohydrate-Binding Module Family 34.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6293628.
GenomeReviewsGene locus CLL_A3414 in contig CP001056_GR.
KEGGcbk:CLL_A3414.
PATRIC19399632. VBICloBot123574_3311.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG304832.
OMAFNNIGSH.
ProtClustDBCLSK899118.

Family and domain databases

InterProIPR015902. Alpha_amylase.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
Gene3DG3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PANTHERPTHR10357. Alpha_amylase. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
SSF81296. Ig_E-set. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB2TR26_CLOBB
AccessionPrimary (citable) accession number: B2TR26
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)