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B2TQX0

- B2TQX0_CLOBB

UniProt

B2TQX0 - B2TQX0_CLOBB

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Protein
Submitted name:

Alpha-amylase

Gene

CLL_A2370

Organism
Clostridium botulinum (strain Eklund 17B / Type B)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciCBOT508765:GJ4H-2360-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported (EC:3.2.1.1Imported)
Submitted name:
Cytoplasmic alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Ordered Locus Names:CLL_A2370Imported
ORF Names:CB17B2286Imported
OrganismiClostridium botulinum (strain Eklund 17B / Type B)Imported
Taxonomic identifieri935198 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
ProteomesiUP000001195: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi508765.CLL_A2370.

Structurei

3D structure databases

ProteinModelPortaliB2TQX0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000094847.
KOiK01176.
OMAiYGVFKCP.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

B2TQX0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTVEIILIII VFAIIGGVMY LNLEQDKAKD VEKNEDKVYI EDKKIKNKTM
60 70 80 90 100
MQYFEWYYPN DGSLWNKVKE HSKKLSKKGI TALWLPPAYK GVGGINDVGY
110 120 130 140 150
GAYDLYDLGE FDQKGTIRTK YGTKEQYLDA INEAHNNNIE VYADTVFNHK
160 170 180 190 200
AGADESECVK AQLVDSNNRN NIIGEEKEIR SFTVFNFSGR NDKYSSYKWN
210 220 230 240 250
AKDFDGVDFD DLTKQNGIFK FVGKEWEQDV DDENGNFDFL MCADLDIDSR
260 270 280 290 300
DVVEELKTWG KWYINECKLD GFRLDAIKHI KFDFFAEWLN DIRSKKGDNV
310 320 330 340 350
FAVGEYWSGD INKLKYYISK SQNVMSLFDV PLHYKFFEAS NLEENFDMRT
360 370 380 390 400
LTQNTLLDYD EKISVTFVDN HDTEPGQALE SWVKPWFKLI AYTFILTRQE
410 420 430 440 450
GYPCIFYGDY YGVPEKGFEG FKNQLDMILN VRKDYAYGDQ CDYFDDKNII
460 470 480 490 500
GWTRQGDLMH DNSGVAVLIS NGNNGSKKMS MGSKNISTTF IDITGNIQEE
510 520
ILIDNEGNGI FKVNNKSYSI WIKK
Length:524
Mass (Da):60,666
Last modified:July 1, 2008 - v1
Checksum:i84D0F00F02F5783E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001056 Genomic DNA. Translation: ACD24706.1.
FR745875 Genomic DNA. Translation: CDH91275.1.
RefSeqiWP_012425441.1. NC_010674.1.
YP_001886559.1. NC_010674.1.

Genome annotation databases

EnsemblBacteriaiACD24706; ACD24706; CLL_A2370.
GeneIDi19963364.
KEGGicbk:CLL_A2370.
PATRICi19397558. VBICloBot123574_2284.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001056 Genomic DNA. Translation: ACD24706.1 .
FR745875 Genomic DNA. Translation: CDH91275.1 .
RefSeqi WP_012425441.1. NC_010674.1.
YP_001886559.1. NC_010674.1.

3D structure databases

ProteinModelPortali B2TQX0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 508765.CLL_A2370.

Protein family/group databases

CAZyi GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACD24706 ; ACD24706 ; CLL_A2370 .
GeneIDi 19963364.
KEGGi cbk:CLL_A2370.
PATRICi 19397558. VBICloBot123574_2284.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000094847.
KOi K01176.
OMAi YGVFKCP.
OrthoDBi EOG65QWH3.

Enzyme and pathway databases

BioCyci CBOT508765:GJ4H-2360-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view ]
PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Complete sequence of Clostridium botulinum strain Eklund."
    Brinkac L.M., Brown J.L., Bruce D., Detter C., Munk C., Smith L.A., Smith T.J., Sutton G., Brettin T.S.
    Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Eklund 17B / Type BImported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Eklund 17BImported.
  3. Shrivastava S., Brinkac L.M., Dodson R.J., Harkins D.M., Durkin A.S., Sutton G.
    Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Eklund 17BImported.
  4. "Genomic and physiological variability within Group II (non-proteolytic) Clostridium botulinum."
    Stringer S.C., Carter A.T., Webb M.D., Wachnicka E., Crossman L.C., Sebaihia M., Peck M.W.
    BMC Genomics 14:333-333(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: B str. Eklund 17BImported.

Entry informationi

Entry nameiB2TQX0_CLOBB
AccessioniPrimary (citable) accession number: B2TQX0
Secondary accession number(s): U4PHP6
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: October 29, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3