B2TPI4 (B2TPI4_CLOBB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribulokinase HAMAP MF_00520 RuleBase RU003455
EC=2.7.1.16 HAMAP MF_00520 RuleBase RU003455

Gene names

Name:	araB HAMAP MF_00520 EMBL ACD25093.1
Ordered Locus Names:	CLL_A2955

Organism

Clostridium botulinum (strain Eklund 17B / Type B) [Complete proteome] [HAMAP]

Taxonomic identifier

508765 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	556 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate. HAMAP MF_00520 RuleBase RU003455 SAAS SAAS005929
Pathway	Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 2/3. HAMAP MF_00520 RuleBase RU003455 SAAS SAAS005929
Sequence similarities	Belongs to the ribulokinase family. HAMAP MF_00520 RuleBase RU003455

Ontologies

Keywords
Biological process	Arabinose catabolism HAMAP MF_00520 RuleBase RU003455 SAAS SAAS005929 Carbohydrate metabolism
Ligand	ATP-binding HAMAP MF_00520 SAAS SAAS005929 Nucleotide-binding
Molecular function	Kinase HAMAP MF_00520 RuleBase RU003455 SAAS SAAS018483 EMBL ACD25093.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	L-arabinose catabolic process Inferred from electronic annotation. Source: HAMAP
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ribulokinase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B2TPI4 [UniParc]. Last modified July 1, 2008. Version 1. Checksum: 244F00FDD5FF791B	FASTA	556	61,687
	10 20 30 40 50 60 MGKYAIGVDF GTLSVRALLI DIKTGEELVT KIYEYPHGIM IDNIPTGEAL GIDWALQHPK 70 80 90 100 110 120 DYEMGLIETL KGIMDENLVS KDDIVGIGVD FTSSTILPIT KDGTPLCYLP EYEHTPHAYA 130 140 150 160 170 180 KLWNHHSAQY CADEIYKIAN ETNQKWLSLY GGKISSEWMI PKIMQIAKES PMVYQASGRI 190 200 210 220 230 240 LEACDWITWL LTGEEARSAC AAGYKAFYHH EMGYPSKDFF KLLDPKMENI VEEKLSTNIK 250 260 270 280 290 300 SIGECLGYLT KDMAEKTGLK EGTPIGVSII DAHASVAASK IDGPGKMLII MGTSSCHMLL 310 320 330 340 350 360 SETEEGIPGV CGIVKDGILP GYFGYEAGQC CVGDHFAWFK ENSLPAKYKE EAKKLGVSDF 370 380 390 400 410 420 DLLNKKLENY RVGQSGLIAL DWFNGVRSTL MDFDLTGMIV GMTLKTKPEE IYRALIEATA 430 440 450 460 470 480 YGTRVIIEQF EKHGVPVNEI CVAGGIPLKN SMLVQIYADI CNKEIKVIDT KQSGALGSAI 490 500 510 520 530 540 LGIAASKEEV TGYKDANDVA RHLGKVKKET FKPIKENVII YNDLYKEYLH LHDYFGKGGN 550 NVMKRLKQIK SASKYK

References

[1]	"Complete sequence of Clostridium botulinum strain Eklund." Brinkac L.M., Brown J.L., Bruce D., Detter C., Munk C., Smith L.A., Smith T.J., Sutton G., Brettin T.S. Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001056 Genomic DNA. Translation: ACD25093.1.
RefSeq	YP_001887141.1. NC_010674.1.
3D structure databases
ProteinModelPortal	B2TPI4.
ModBase	Search...
Protein-protein interaction databases
STRING	B2TPI4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6293547.
GenomeReviews	Gene locus CLL_A2955 in contig CP001056_GR.
KEGG	cbk:CLL_A2955.
PATRIC	19398726. VBICloBot123574_2865.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG312681.
OMA	YEAGQSC.
ProtClustDB	PRK04123.
Family and domain databases
HAMAP	MF_00520. Ribulokinase. [Tree]
InterPro	IPR000577. Carb_kinase_FGGY. IPR018485. Carb_kinase_FGGY_C. IPR018483. Carb_kinase_FGGY_CS. IPR018484. Carb_kinase_FGGY_N. IPR005929. L_ribulokin. [Graphical view]
KO	K00853.
PANTHER	PTHR10196. FGGY_kin. 1 hit.
Pfam	PF02782. FGGY_C. 1 hit. PF00370. FGGY_N. 1 hit. [Graphical view]
TIGRFAMs	TIGR01234. L-ribulokinase. 1 hit.
PROSITE	PS00445. FGGY_KINASES_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B2TPI4_CLOBB

Accession

Primary (citable) accession number: B2TPI4

Entry history

Integrated into UniProtKB/TrEMBL:	July 1, 2008
Last sequence update:	July 1, 2008
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)