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B2TMN1

- B2TMN1_CLOBB

UniProt

B2TMN1 - B2TMN1_CLOBB

Protein

Superoxide dismutase

Gene

sodA

Organism
Clostridium botulinum (strain Eklund 17B / Type B)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 39 (01 Oct 2014)
      Sequence version 1 (01 Jul 2008)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: InterPro
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotationImported

    Enzyme and pathway databases

    BioCyciCBOT508765:GJ4H-1826-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:sodAImported
    Ordered Locus Names:CLL_A1835Imported
    ORF Names:CB17B1755Imported
    OrganismiClostridium botulinum (strain Eklund 17B / Type B)Imported
    Taxonomic identifieri935198 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
    ProteomesiUP000001195: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi508765.CLL_A1835.

    Structurei

    3D structure databases

    ProteinModelPortaliB2TMN1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0605.
    HOGENOMiHOG000013583.
    KOiK04564.
    OMAiETINIHY.
    OrthoDBiEOG63NMNT.

    Family and domain databases

    InterProiIPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view]
    PANTHERiPTHR11404. PTHR11404. 1 hit.
    PfamiPF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000349. SODismutase. 1 hit.
    PRINTSiPR01703. MNSODISMTASE.
    SUPFAMiSSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEiPS00088. SOD_MN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B2TMN1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIKMFDKIEL QYGYNDLEPY IDGETINIHY NKHLQTYVNN LNKLLEGYEE    50
    LIDGKTLEQL LANVDDFPKE IRQDLINQGG GVANHNLYFY ILSPNPKKNP 100
    EGILLYEINN KFGDIENLKI QLTNLAISQF GSGYGFLVKD SRGNLSIVKT 150
    LNQNSPISNG LTPILCIDVW EHAYYLKYKN LRADYVKNIW NVIDWSKVQG 200
    LYENYVI 207
    Length:207
    Mass (Da):23,959
    Last modified:July 1, 2008 - v1
    Checksum:i02E65B8F60CF1407
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001056 Genomic DNA. Translation: ACD24718.1.
    FR745875 Genomic DNA. Translation: CDH90744.1.
    RefSeqiYP_001886028.1. NC_010674.1.

    Genome annotation databases

    EnsemblBacteriaiACD24718; ACD24718; CLL_A1835.
    GeneIDi6292082.
    KEGGicbk:CLL_A1835.
    PATRICi19396496. VBICloBot123574_1757.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001056 Genomic DNA. Translation: ACD24718.1 .
    FR745875 Genomic DNA. Translation: CDH90744.1 .
    RefSeqi YP_001886028.1. NC_010674.1.

    3D structure databases

    ProteinModelPortali B2TMN1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 508765.CLL_A1835.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACD24718 ; ACD24718 ; CLL_A1835 .
    GeneIDi 6292082.
    KEGGi cbk:CLL_A1835.
    PATRICi 19396496. VBICloBot123574_1757.

    Phylogenomic databases

    eggNOGi COG0605.
    HOGENOMi HOG000013583.
    KOi K04564.
    OMAi ETINIHY.
    OrthoDBi EOG63NMNT.

    Enzyme and pathway databases

    BioCyci CBOT508765:GJ4H-1826-MONOMER.

    Family and domain databases

    InterProi IPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view ]
    PANTHERi PTHR11404. PTHR11404. 1 hit.
    Pfami PF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000349. SODismutase. 1 hit.
    PRINTSi PR01703. MNSODISMTASE.
    SUPFAMi SSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEi PS00088. SOD_MN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Clostridium botulinum strain Eklund."
      Brinkac L.M., Brown J.L., Bruce D., Detter C., Munk C., Smith L.A., Smith T.J., Sutton G., Brettin T.S.
      Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Eklund 17B / Type BImported.
    2. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: Eklund 17BImported.
    3. Shrivastava S., Brinkac L.M., Dodson R.J., Harkins D.M., Durkin A.S., Sutton G.
      Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: Eklund 17BImported.
    4. "Genomic and physiological variability within Group II (non-proteolytic) Clostridium botulinum."
      Stringer S.C., Carter A.T., Webb M.D., Wachnicka E., Crossman L.C., Sebaihia M., Peck M.W.
      BMC Genomics 14:333-333(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: B str. Eklund 17BImported.

    Entry informationi

    Entry nameiB2TMN1_CLOBB
    AccessioniPrimary (citable) accession number: B2TMN1
    Secondary accession number(s): U4P5U4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 1, 2008
    Last sequence update: July 1, 2008
    Last modified: October 1, 2014
    This is version 39 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3