B2TKD2 (B2TKD2_CLOBB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL ACD22809.1
EC=5.1.1.1 EMBL ACD22809.1

Gene names

Name:	alr EMBL ACD22809.1
Ordered Locus Names:	CLL_A1573 EMBL ACD22809.1

Organism

Clostridium botulinum (strain Eklund 17B / Type B) [Complete proteome] [HAMAP] EMBL ACD22809.1

Taxonomic identifier

508765 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium › Clostridium botulinum › Clostridium botulinum B

Protein attributes

Sequence length	386 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS011079
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS011079
Molecular function	Isomerase SAAS SAAS011079 EMBL ACD22809.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B2TKD2 [UniParc]. Last modified July 1, 2008. Version 1. Checksum: 1B36636BDEEB26D3	FASTA	386	43,373
	10 20 30 40 50 60 MEKIMRPVWA EIDLDAIAYN MRNIKKLAQN KDVIAVVKAD CYGHGALDVV PTLLENGASR 70 80 90 100 110 120 LAVAVLTEAI ELRNNNITAP IMILGYTPEY LFEEVVNYDI EQTVYDLEYA KKLSHLAIKF 130 140 150 160 170 180 NKKAKVHIAI DTGMGRIGFI PNEKAIKDIK KIYNLKGLDV IGIFTHFSTS DETDKEYTNE 190 200 210 220 230 240 QFNKFTSFID MLSKVGVKIP IKHISNSGAI IDMPKTYLDS VRAGIILYGY YPSDEINKDN 250 260 270 280 290 300 IKLKPALTLK ASLTRVQELD INSYISYGKT FKTERKSIIA TLPIGYADGY SRLLAPGAKV 310 320 330 340 350 360 IINGKFSPII GRICMDQCMI DVTDIDDIHV GDEVIILGED GNLKLTANDL AKSMGTINYE 370 380 ILCMLKYRIP RVYMKNGKIF TVRNYL

References

[1]

"Complete sequence of Clostridium botulinum strain Eklund." Brinkac L.M., Brown J.L., Bruce D., Detter C., Munk C., Smith L.A., Smith T.J., Sutton G., Brettin T.S. Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Eklund 17B / Type B.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001056 Genomic DNA. Translation: ACD22809.1.
RefSeq	YP_001885767.1. NC_010674.1.
3D structure databases
ProteinModelPortal	B2TKD2.
ModBase	Search...
Protein-protein interaction databases
STRING	508765.CLL_A1573.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACD22809; ACD22809; CLL_A1573.
GeneID	6294126.
KEGG	cbk:CLL_A1573.
PATRIC	19395990. VBICloBot123574_1505.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0787.
HOGENOM	HOG000031444.
KO	K01775.
OMA	PTLCNPQ.
ProtClustDB	PRK00053.
Enzyme and pathway databases
BioCyc	CBOT508765:GJ4H-1564-MONOMER.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B2TKD2_CLOBB

Accession

Primary (citable) accession number: B2TKD2

Entry history

Integrated into UniProtKB/TrEMBL:	July 1, 2008
Last sequence update:	July 1, 2008
Last modified:	May 1, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)