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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

Bphyt_4519

Organism
Burkholderia phytofirmans (strain DSM 17436 / PsJN)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciBPHY398527:GJEX-4582-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported
Gene namesi
Ordered Locus Names:Bphyt_4519Imported
OrganismiBurkholderia phytofirmans (strain DSM 17436 / PsJN)Imported
Taxonomic identifieri398527 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
ProteomesiUP000001739 Componenti: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi398527.Bphyt_4519.

Structurei

3D structure databases

ProteinModelPortaliB2TGT1.
SMRiB2TGT1. Positions 2-421.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK00823.
OMAiTDWFLFC.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B2TGT1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNAELKSRK DAATPRGVGV MCDFYAERAE NAELWDVEGR RFIDFAAGIA
60 70 80 90 100
VCNTGHRHPK ILAAIRDQLD HFTHTAYQIV PYASYVELAE KLNERAPGDH
110 120 130 140 150
PKKTAFFTTG AEAVENAIKI ARAATGRPGV IAFTGGFHGR TLMGMALTGK
160 170 180 190 200
VAPYKIGFGP FPSDVFHAPF PNPLHGVTTA DSLKAIEFLF KADIDPKRVA
210 220 230 240 250
AIIFEPVQGE GGFYPAPAEF VRALRKLCNE HGILLIADEV QTGFARTGKL
260 270 280 290 300
FAMHHYDVVP DLMTVAKSLA GGMPLSGVIG RADVMDAAAP GGLGGTYAGN
310 320 330 340 350
PLAVAAAHAV LDIIDEEKLC ERATLLGDRV KAKLIALQSD VPQIADVRGP
360 370 380 390 400
GGMVAVEFCK AGGTEPDAEF TKRVQTRALE RGLLLLVCGV YSNVVRFLFP
410 420
LTIQDAVFDE AMAILEDVIK DSVTVAA
Length:427
Mass (Da):45,727
Last modified:July 1, 2008 - v1
Checksum:iAAB4DC3EE892CC43
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001053 Genomic DNA. Translation: ACD18892.1.
RefSeqiWP_012426408.1. NC_010676.1.
YP_001888262.1. NC_010676.1.

Genome annotation databases

EnsemblBacteriaiACD18892; ACD18892; Bphyt_4519.
KEGGibpy:Bphyt_4519.
PATRICi19203559. VBIBurPhy117947_0592.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001053 Genomic DNA. Translation: ACD18892.1.
RefSeqiWP_012426408.1. NC_010676.1.
YP_001888262.1. NC_010676.1.

3D structure databases

ProteinModelPortaliB2TGT1.
SMRiB2TGT1. Positions 2-421.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi398527.Bphyt_4519.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACD18892; ACD18892; Bphyt_4519.
KEGGibpy:Bphyt_4519.
PATRICi19203559. VBIBurPhy117947_0592.

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK00823.
OMAiTDWFLFC.
OrthoDBiEOG6QVRHN.

Enzyme and pathway databases

BioCyciBPHY398527:GJEX-4582-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 2 of Burkholderia phytofirmans PsJN."
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N.
    , Nowak J., Sessitsch A., Lazarovits G., Compant S., Barka E., Tiedje J.
    Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 17436 / PsJNImported.

Entry informationi

Entry nameiB2TGT1_BURPP
AccessioniPrimary (citable) accession number: B2TGT1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: May 27, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.