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B2TBC0 (B2TBC0_BURPP) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Selenide, water dikinase HAMAP MF_00625
EC=2.7.9.3 HAMAP MF_00625
Alternative name(s):
Selenium donor protein HAMAP MF_00625
Selenophosphate synthase HAMAP MF_00625
Gene names
Name:selD HAMAP MF_00625
Ordered Locus Names:Bphyt_6563
OrganismBurkholderia phytofirmans (strain DSM 17436 / PsJN) [Complete proteome] [HAMAP] EMBL ACD20862.1
Taxonomic identifier398527 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia

Protein attributes

Sequence length358 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes selenophosphate from selenide and ATP By similarity. HAMAP MF_00625 SAAS SAAS023061

Catalytic activity

ATP + selenide + H2O = AMP + selenophosphate + phosphate. HAMAP MF_00625 SAAS SAAS023061

Cofactor

Magnesium By similarity. HAMAP MF_00625 SAAS SAAS023061

Sequence similarities

Belongs to the selenophosphate synthase 1 family. Class I subfamily. HAMAP MF_00625

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding240 – 2467ATP By similarity HAMAP MF_00625

Sites

Active site271 By similarity HAMAP MF_00625
Site301Important for catalytic activity By similarity HAMAP MF_00625

Sequences

Sequence LengthMass (Da)Tools
B2TBC0 [UniParc].

Last modified July 1, 2008. Version 1.
Checksum: FFE19C67AB025AC0

FASTA35836,763
        10         20         30         40         50         60 
MPATMTDTPS HASASPRLTS LSHGGGCGCK IAPGLLADLL KRSAPLPFFP DLLVGNDTAD 

        70         80         90        100        110        120 
DAAVYRLNDD QAIVATTDFF MPIVDDPFDF GRIAATNALS DVYAMGGKPI MALAIVGMPI 

       130        140        150        160        170        180 
NVLPHDVIAA VLKGGESVCA EAGIPLAGGH SIDSVEPIYG LVAIGVVDPK RVKRNAGAQA 

       190        200        210        220        230        240 
GDVLILGKPL GVGILSAALK KDRLDAAGYA AMIGATTKLN RPGADLSRLD GVHALTDITG 

       250        260        270        280        290        300 
FGLLGHTLEL ARGSNLTARV RYADLPWLPD VVSLAEAGIF TGASGRNWDA YGKSIVLPSS 

       310        320        330        340        350 
LSATARTLLT DPQTSGGLLV SCAPQAVDEV LALFRADGFG EACVIGEMVS GEGRVEVI

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References

[1]"Complete sequence of chromosome 2 of Burkholderia phytofirmans PsJN."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Nowak J., Sessitsch A., Lazarovits G., Compant S., Barka E., Tiedje J.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001053 Genomic DNA. Translation: ACD20862.1.
RefSeqYP_001890233.1. NC_010676.1.

3D structure databases

ProteinModelPortalB2TBC0.
ModBaseSearch...

Protein-protein interaction databases

STRINGB2TBC0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6279946.
GenomeReviewsGene locus Bphyt_6563 in contig CP001053_GR.
KEGGbpy:Bphyt_6563.
PATRIC19208016. VBIBurPhy117947_2810.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG383791.
OMAMMAIAIL.
ProtClustDBPRK00943.

Family and domain databases

HAMAPMF_00625. SelD.
[Tree]
InterProIPR000728. AIR_synth.
IPR010918. AIR_synth_C.
IPR016188. PurM_N-like.
IPR004536. SelD.
IPR023061. SelD_I.
[Graphical view]
KOK01008.
PfamPF00586. AIRS. 1 hit.
PF02769. AIRS_C. 1 hit.
[Graphical view]
PIRSFPIRSF036407. Selenphspht_syn. 1 hit.
SUPFAMSSF56042. AIR_synth_C. 1 hit.
SSF55326. PurM_N-like. 1 hit.
TIGRFAMsTIGR00476. SelD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB2TBC0_BURPP
AccessionPrimary (citable) accession number: B2TBC0
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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