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B2T474 (B2T474_BURPP) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Malate synthase G 1 HAMAP MF_00641
EC=2.3.3.9 HAMAP MF_00641
Gene names
Name:glcB1 HAMAP MF_00641
Ordered Locus Names:Bphyt_1977
OrganismBurkholderia phytofirmans (strain DSM 17436 / PsJN) [Complete proteome] [HAMAP] EMBL ACD16385.1
Taxonomic identifier398527 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia

Protein attributes

Sequence length724 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA. HAMAP MF_00641 SAAS SAAS006253

Pathway

Carbohydrate metabolism; glyoxylate cycle; (S)-malate from isocitrate: step 2/2. HAMAP MF_00641 SAAS SAAS006253

Subunit structure

Monomer By similarity. HAMAP MF_00641 SAAS SAAS006253

Subcellular location

Cytoplasm By similarity HAMAP MF_00641.

Sequence similarities

Belongs to the malate synthase family. GlcB subfamily. HAMAP MF_00641

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3401Proton acceptor By similarity HAMAP MF_00641
Active site6331Proton donor By similarity HAMAP MF_00641

Sequences

Sequence LengthMass (Da)Tools
B2T474 [UniParc].

Last modified July 1, 2008. Version 1.
Checksum: F54490B3B3625FFA

FASTA72479,217
        10         20         30         40         50         60 
MTQMNTRGGL QVAANLDQFV ETEALPGTGI DSAAFWSGFD ALVHELAPKN RALLAERDRL 

        70         80         90        100        110        120 
QTELDNWHRA NPGPVRDLRA YRAFLEGIGY IVPAPASVKA TTDNVDTEIA EQAGPQLVVP 

       130        140        150        160        170        180 
LSNQRYALNA ANARWGSLYD ALYGTDAIPE TGGAEKQKAF NPVRGAAVIA YARKFLDQAA 

       190        200        210        220        230        240 
PLANGSHADA TRYSVDGGKL VVTLKNGTSE LKTPAQFIGY QGEESAPSAV LLKHNGLHFE 

       250        260        270        280        290        300 
IQIDASDSIG RTDAAHVKDV VVEAAVSTII DCEDSVAAVD ADDKVLLYRN WLGLMTGDLT 

       310        320        330        340        350        360 
EEVTKNGKTF TRRLNADRVY TAANGTAPVV LHGRSLLFIR NVGHLMTNPA VLTKDGHEIP 

       370        380        390        400        410        420 
EGILDAVITT LCALHDRKHQ LNSRTGSIYI VKPKMHGPAE VAFASELFSR VEDLLKLPRN 

       430        440        450        460        470        480 
TIKMGIMDEE RRTSVNLLAC IAEASERVAF INTGFLDRTG DEMHSAMEAG PMMRKGDMKS 

       490        500        510        520        530        540 
SAWIAAYERS NVLVGLSAGL RGRSQIGKGM WAMPDLMHAM LEQKIAHPKA GANTAWVPSP 

       550        560        570        580        590        600 
TAATLHALHY HQVDVQAVQR ELERTDYATV RDELLDGLLT IPVVAEAKWS DDEIRSEIDN 

       610        620        630        640        650        660 
NAQGILGYVV RWIDQGVGCS KVPDIHDVGL MEDRATLRIS SQHIANWLYH GVVKRELVEE 

       670        680        690        700        710        720 
TFKRMAKVVD EQNAGDPLYK PMAPGFDTIA FKAAQALVFE GRQQPSGYTE PLLHKFRLEV 


KKEV

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References

[1]"Complete sequence of chromosome 1 of Burkholderia phytofirmans PsJN."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Nowak J., Sessitsch A., Lazarovits G., Compant S., Barka E., Tiedje J.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001052 Genomic DNA. Translation: ACD16385.1.
RefSeqYP_001895609.1. NC_010681.1.

3D structure databases

ProteinModelPortalB2T474.
SMRB2T474. Positions 10-722.
ModBaseSearch...

Protein-protein interaction databases

STRINGB2T474.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6281691.
GenomeReviewsGene locus Bphyt_1977 in contig CP001052_GR.
KEGGbpy:Bphyt_1977.
PATRIC19214146. VBIBurPhy117947_5845.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG350005.
OMAIQIDAND.
ProtClustDBPRK02999.

Family and domain databases

HAMAPMF_00641. Malate_synth_G.
[Tree]
InterProIPR011076. Malate_synth-like.
IPR023310. Malate_synth_G_beta_sub_dom.
IPR001465. Malate_synthase.
IPR006253. Malate_synthG.
[Graphical view]
Gene3DG3DSA:2.170.170.11. Malate_synth_G_beta_sub_dom. 2 hits.
KOK01638.
PANTHERPTHR21631:SF1. Malate_synthase. 1 hit.
PfamPF01274. Malate_synthase. 1 hit.
[Graphical view]
SUPFAMSSF51645. Malat_synth_like. 1 hit.
TIGRFAMsTIGR01345. Malate_syn_G. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB2T474_BURPP
AccessionPrimary (citable) accession number: B2T474
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info