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Reviewed, UniProtKB/Swiss-Prot B2T3F4 (RPIA_BURPP)

Last modified February 9, 2010. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Ribose-5-phosphate isomerase A
    EC=5.3.1.6
Alternative name(s):
    Phosphoriboisomerase A
      Short name=PRI
Gene names
Name: rpiA
Ordered Locus Names: Bphyt_1709
OrganismBurkholderia phytofirmans (strain DSM 17436 / PsJN) [Complete proteome] [HAMAP]
Taxonomic identifier398527 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia

Protein attributes

Sequence length231 AA.
Sequence statusComplete.
Protein existenceInferred from homology.

General annotation (Comments)

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 231231Ribose-5-phosphate isomerase A HAMAP MF_00170
PRO_1000097654

Sequences

Sequence LengthMass (Da)Tools
B2T3F4-1 [UniParc].

Last modified July 1, 2008. Version 1.
Checksum: ACC60063D163FDC1

FASTA23124,026
        10         20         30         40         50         60 
MTQDELKQLV GQAAADYVNA TVPEGAVIGV GTGSTANCFI DALAGNKARY RGAVSSSLAT 

        70         80         90        100        110        120 
TARLQTHGIK VFDLNEIDSL PVYVDGADEI DRSGAMIKGG GGALTREKIV ASVSDVFVCI 

       130        140        150        160        170        180 
ADASKLVETL GTFPLPIEVV PMARTAIGRR VTALGGVPVV RVTKEGVPFI TDNGNEIIDV 

       190        200        210        220        230 
KGLRISDPRT LETHINAWPG VVTVGLFAAR GANLCLLGTD TGVETIEYSK G 

« Hide

References

[1]"Complete sequence of chromosome 1 of Burkholderia phytofirmans PsJN."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Nowak J., Sessitsch A., Lazarovits G., Compant S., Barka E., Tiedje J.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001052 Genomic DNA. Translation: ACD16117.1.
RefSeqYP_001895341.1.

3D structure databases

SMRB2T3F4. Positions 1-226.
ModBaseSearch...

Genome annotation databases

GeneID6284298.
GenomeReviewsGene locus Bphyt_1709 in contig CP001052_GR.
KEGGbpy:Bphyt_1709.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG515603.
OMAVFDLNSV.

Family and domain databases

HAMAPMF_00170. Rib_5P_isom_A.
[Tree]
InterProIPR004788. Ribose5P_isomerase_typA.
IPR020672. Ribose5P_isomerase_typA_subgr.
IPR007324. Sugar-bd_dom_put.
[Graphical view]
PANTHERPTHR11934. RpiA. 1 hit.
PfamPF06026. Rib_5-P_isom_A. 1 hit.
PF04198. Sugar-bind. 1 hit.
[Graphical view]
TIGRFAMsTIGR00021. rpiA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRPIA_BURPP
AccessionPrimary (citable) accession number: B2T3F4
Entry history
Integrated into UniProtKB/Swiss-Prot: March 24, 2009
Last sequence update: July 1, 2008
Last modified: February 9, 2010
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents