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Protein
Submitted name:

Superoxide dismutase copper/zinc binding

Gene

Bphyt_1018

Organism
Paraburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN) (Burkholderia phytofirmans)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Superoxide dismutase copper/zinc bindingImported
Gene namesi
Ordered Locus Names:Bphyt_1018Imported
OrganismiParaburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN) (Burkholderia phytofirmans)Imported
Taxonomic identifieri398527 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeParaburkholderia
Proteomesi
  • UP000001739 Componenti: Chromosome 1

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 30HelicalSequence analysisAdd BLAST19

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi398527.Bphyt_1018.

Structurei

3D structure databases

ProteinModelPortaliB2T180.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini47 – 175Sod_CuInterPro annotationAdd BLAST129

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4108Z7T. Bacteria.
COG2032. LUCA.
HOGENOMiHOG000263448.
KOiK04565.
OMAiVHLDMIL.
OrthoDBiPOG091H05EB.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR024134. SOD_Cu/Zn_/chaperone.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PANTHERiPTHR10003. PTHR10003. 1 hit.
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.

Sequencei

Sequence statusi: Complete.

B2T180-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKRIDGQAV HAFIVLTASS VLLCGCSAFL RPQEKRADAQ LLPTVGNQAR
60 70 80 90 100
GLVTFIERSD GVQVTYNLAG MPPNSDHALQ VHERGDCNAA DGSSAGQVFS
110 120 130 140 150
PAAERLKSGA RVEGDLGNIH ADANGVATGF IVAPDVSLDG IRSVLQRAVL
160 170
LHHDATDPYA YPQHGAGPAL ACGLIRQ
Length:177
Mass (Da):18,476
Last modified:July 1, 2008 - v1
Checksum:i35870F3E304D6AFD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001052 Genomic DNA. Translation: ACD15437.1.
RefSeqiWP_012432067.1. NC_010681.1.

Genome annotation databases

EnsemblBacteriaiACD15437; ACD15437; Bphyt_1018.
KEGGibpy:Bphyt_1018.
PATRICi19212020. VBIBurPhy117947_4797.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001052 Genomic DNA. Translation: ACD15437.1.
RefSeqiWP_012432067.1. NC_010681.1.

3D structure databases

ProteinModelPortaliB2T180.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi398527.Bphyt_1018.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACD15437; ACD15437; Bphyt_1018.
KEGGibpy:Bphyt_1018.
PATRICi19212020. VBIBurPhy117947_4797.

Phylogenomic databases

eggNOGiENOG4108Z7T. Bacteria.
COG2032. LUCA.
HOGENOMiHOG000263448.
KOiK04565.
OMAiVHLDMIL.
OrthoDBiPOG091H05EB.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR024134. SOD_Cu/Zn_/chaperone.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PANTHERiPTHR10003. PTHR10003. 1 hit.
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiB2T180_PARPJ
AccessioniPrimary (citable) accession number: B2T180
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: November 2, 2016
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.