B2SU53 (B2SU53_XANOP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Tal2b, also PthXo1, TAL effector AvrBs3/PthA family EMBL ACD58243.2

Gene names

Name:	pthXo1 EMBL ACD58243.2
Synonyms:	tal2b EMBL ACD58243.2
Ordered Locus Names:	PXO_00227 EMBL ACD58243.2

Organism

Xanthomonas oryzae pv. oryzae (strain PXO99A) [Complete proteome] [HAMAP] EMBL ACD58243.2

Taxonomic identifier

360094 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas › Xanthomonas oryzae › Xanthomonas oryzae pv. oryzae

Protein attributes

Sequence length	1373 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 3UGM Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	B2SU53 [UniParc]. Last modified October 16, 2013. Version 2. Checksum: C96C8A8A862A8217	FASTA	1,373	143,535
	10 20 30 40 50 60 MDPIRSRTPS PARELLPGPQ PDRVQPTADR GGAPPAGGPL DGLPARRTMS RTRLPSPPAP 70 80 90 100 110 120 SPAFSAGSFS DLLRQFDPSL LDTSLLDSMP AVGTPHTAAA PAECDEVQSG LRAADDPPPT 130 140 150 160 170 180 VRVAVTAARP PRAKPAPRRR AAQPSDASPA AQVDLRTLGY SQQQQEKIKP KVGSTVAQHH 190 200 210 220 230 240 EALVGHGFTH AHIVALSRHP AALGTVAVKY QDMIAALPEA THEDIVGVGK QWSGARALEA 250 260 270 280 290 300 LLTVAGELRG PPLQLDTGQL VKIAKRGGVT AVEAVHASRN ALTGAPLNLT PAQVVAIASN 310 320 330 340 350 360 NGGKQALETV QRLLPVLCQA HGLTPAQVVA IASHDGGKQA LETMQRLLPV LCQAHGLPPD 370 380 390 400 410 420 QVVAIASNIG GKQALETVQR LLPVLCQAHG LTPDQVVAIA SHGGGKQALE TVQRLLPVLC 430 440 450 460 470 480 QAHGLTPDQV VAIASHDGGK QALETVQRLL PVLCQAHGLT PDQVVAIASN GGGKQALETV 490 500 510 520 530 540 QRLLPVLCQA HGLTPDQVVA IASNGGKQAL ETVQRLLPVL CQAHGLTPDQ VVAIASHDGG 550 560 570 580 590 600 KQALETVQRL LPVLCQTHGL TPAQVVAIAS HDGGKQALET VQQLLPVLCQ AHGLTPDQVV 610 620 630 640 650 660 AIASNIGGKQ ALATVQRLLP VLCQAHGLTP DQVVAIASNG GGKQALETVQ RLLPVLCQAH 670 680 690 700 710 720 GLTPDQVVAI ASNGGGKQAL ETVQRLLPVL CQAHGLTQVQ VVAIASNIGG KQALETVQRL 730 740 750 760 770 780 LPVLCQAHGL TPAQVVAIAS HDGGKQALET VQRLLPVLCQ AHGLTPDQVV AIASNGGGKQ 790 800 810 820 830 840 ALETVQRLLP VLCQAHGLTQ EQVVAIASNN GGKQALETVQ RLLPVLCQAH GLTPDQVVAI 850 860 870 880 890 900 ASNGGGKQAL ETVQRLLPVL CQAHGLTPAQ VVAIASNIGG KQALETVQRL LPVLCQDHGL 910 920 930 940 950 960 TLAQVVAIAS NIGGKQALET VQRLLPVLCQ AHGLTQDQVV AIASNIGGKQ ALETVQRLLP 970 980 990 1000 1010 1020 VLCQDHGLTP DQVVAIASNI GGKQALETVQ RLLPVLCQDH GLTLDQVVAI ASNGGKQALE 1030 1040 1050 1060 1070 1080 TVQRLLPVLC QDHGLTPDQV VAIASNSGGK QALETVQRLL PVLCQDHGLT PNQVVAIASN 1090 1100 1110 1120 1130 1140 GGKQALESIV AQLSRPDPAL AALTNDHLVA LACLGGRPAM DAVKKGLPHA PELIRRVNRR 1150 1160 1170 1180 1190 1200 IGERTSHRVA DYAQVVRVLE FFQCHSHPAY AFDEAMTQFG MSRNGLVQLF RRVGVTELEA 1210 1220 1230 1240 1250 1260 RGGTLPPASQ RWDRILQASG MKRAKPSPTS AQTPDQASLH AFADSLERDL DAPSPMHEGD 1270 1280 1290 1300 1310 1320 QTGASSRKRS RSDRAVTGPS AQHSFEVRVP EQRDALHLPL SWRVKRPRTR IGGGLPDPGT 1330 1340 1350 1360 1370 PIAADLAASS TVMWEQDAAP FAGAADDFPA FNEEELAWLM ELLPQSGSVG GTI

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A." Salzberg S.L., Sommer D.D., Schatz M.C., Phillippy A.M., Rabinowicz P.D., Tsuge S., Furutani A., Ochiai H., Delcher A.L., Kelley D., Madupu R., Puiu D., Radune D., Shumway M., Trapnell C., Aparna G., Jha G., Pandey A. , Patil P.B., Ishihara H., Meyer D.F., Szurek B., Verdier V., Koebnik R., Dow J.M., Ryan R.P., Hirata H., Tsuyumu S., Won Lee S., Seo Y.-S., Sriariyanum M., Ronald P.C., Sonti R.V., Van Sluys M.-A., Leach J.E., White F.F., Bogdanove A.J. BMC Genomics 9:204-204(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PXO99A EMBL ACD58243.2.
[2]	"The crystal structure of TAL effector PthXo1 bound to its DNA target." Mak A.N., Bradley P., Cernadas R.A., Bogdanove A.J., Stoddard B.L. Science 335:716-719(2012) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (3.00 ANGSTROMS) OF 127-1149.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

CP000967 Genomic DNA. Translation: ACD58243.2.

RefSeq

YP_001912775.1. NC_010717.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3UGM	X-ray	3.00	A	127-1149	[»]

ModBase

Search...

MobiDB

Search...

Protein-protein interaction databases

STRING

360094.PXO_00227.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblBacteria

ACD58243; ACD58243; PXO_00227.

GeneID

6305128.

KEGG

xop:PXO_00227.

PATRIC

24122580. VBIXanOry73153_1663.

Organism-specific databases

CMR

Search...

Phylogenomic databases

HOGENOM

HOG000060719.

OMA

QIRPLHL.

OrthoDB

EOG64JFJ5.

ProtClustDB

CLSK517709.

Enzyme and pathway databases

BioCyc

XORY360094:GI45-1609-MONOMER.

Family and domain databases

InterPro

IPR005042. Avirulence_PthA-rel_XANspp.
[Graphical view]

Pfam

PF03377. Avirulence. 3 hits.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

B2SU53_XANOP

Accession

Primary (citable) accession number: B2SU53

Entry history

Integrated into UniProtKB/TrEMBL:	July 1, 2008
Last sequence update:	October 16, 2013
Last modified:	December 11, 2013
This is version 31 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)