Tal2b, also PthXo1, TAL effector AvrBs3/PthA family - Xanthomonas oryzae pv. oryzae (strain PXO99A)

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B2SU53 (B2SU53_XANOP) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 30. History...

Clusters with 100%, 90%, 50% identity |

Third-party data

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Names·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

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Names·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Submitted name:
Tal2b, also PthXo1, TAL effector AvrBs3/PthA family EMBL ACD58243.2

Gene names

Name:	pthXo1 EMBL ACD58243.2
Synonyms:	tal2b EMBL ACD58243.2
Ordered Locus Names:	PXO_00227 EMBL ACD58243.2

Organism

Xanthomonas oryzae pv. oryzae (strain PXO99A) [Complete proteome] [HAMAP] EMBL ACD58243.2

Taxonomic identifier

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas ›

Protein attributes

Sequence length	1373 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 3UGM Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence

Length

Mass (Da)

Tools

B2SU53 [UniParc].

Last modified October 16, 2013. Version 2.
Checksum: C96C8A8A862A8217
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1,373

143,535

        10         20         30         40         50         60 
MDPIRSRTPS PARELLPGPQ PDRVQPTADR GGAPPAGGPL DGLPARRTMS RTRLPSPPAP 

        70         80         90        100        110        120 
SPAFSAGSFS DLLRQFDPSL LDTSLLDSMP AVGTPHTAAA PAECDEVQSG LRAADDPPPT 

       130        140        150        160        170        180 
VRVAVTAARP PRAKPAPRRR AAQPSDASPA AQVDLRTLGY SQQQQEKIKP KVGSTVAQHH 

       190        200        210        220        230        240 
EALVGHGFTH AHIVALSRHP AALGTVAVKY QDMIAALPEA THEDIVGVGK QWSGARALEA 

       250        260        270        280        290        300 
LLTVAGELRG PPLQLDTGQL VKIAKRGGVT AVEAVHASRN ALTGAPLNLT PAQVVAIASN 

       310        320        330        340        350        360 
NGGKQALETV QRLLPVLCQA HGLTPAQVVA IASHDGGKQA LETMQRLLPV LCQAHGLPPD 

       370        380        390        400        410        420 
QVVAIASNIG GKQALETVQR LLPVLCQAHG LTPDQVVAIA SHGGGKQALE TVQRLLPVLC 

       430        440        450        460        470        480 
QAHGLTPDQV VAIASHDGGK QALETVQRLL PVLCQAHGLT PDQVVAIASN GGGKQALETV 

       490        500        510        520        530        540 
QRLLPVLCQA HGLTPDQVVA IASNGGKQAL ETVQRLLPVL CQAHGLTPDQ VVAIASHDGG 

       550        560        570        580        590        600 
KQALETVQRL LPVLCQTHGL TPAQVVAIAS HDGGKQALET VQQLLPVLCQ AHGLTPDQVV 

       610        620        630        640        650        660 
AIASNIGGKQ ALATVQRLLP VLCQAHGLTP DQVVAIASNG GGKQALETVQ RLLPVLCQAH 

       670        680        690        700        710        720 
GLTPDQVVAI ASNGGGKQAL ETVQRLLPVL CQAHGLTQVQ VVAIASNIGG KQALETVQRL 

       730        740        750        760        770        780 
LPVLCQAHGL TPAQVVAIAS HDGGKQALET VQRLLPVLCQ AHGLTPDQVV AIASNGGGKQ 

       790        800        810        820        830        840 
ALETVQRLLP VLCQAHGLTQ EQVVAIASNN GGKQALETVQ RLLPVLCQAH GLTPDQVVAI 

       850        860        870        880        890        900 
ASNGGGKQAL ETVQRLLPVL CQAHGLTPAQ VVAIASNIGG KQALETVQRL LPVLCQDHGL 

       910        920        930        940        950        960 
TLAQVVAIAS NIGGKQALET VQRLLPVLCQ AHGLTQDQVV AIASNIGGKQ ALETVQRLLP 

       970        980        990       1000       1010       1020 
VLCQDHGLTP DQVVAIASNI GGKQALETVQ RLLPVLCQDH GLTLDQVVAI ASNGGKQALE 

      1030       1040       1050       1060       1070       1080 
TVQRLLPVLC QDHGLTPDQV VAIASNSGGK QALETVQRLL PVLCQDHGLT PNQVVAIASN 

      1090       1100       1110       1120       1130       1140 
GGKQALESIV AQLSRPDPAL AALTNDHLVA LACLGGRPAM DAVKKGLPHA PELIRRVNRR 

      1150       1160       1170       1180       1190       1200 
IGERTSHRVA DYAQVVRVLE FFQCHSHPAY AFDEAMTQFG MSRNGLVQLF RRVGVTELEA 

      1210       1220       1230       1240       1250       1260 
RGGTLPPASQ RWDRILQASG MKRAKPSPTS AQTPDQASLH AFADSLERDL DAPSPMHEGD 

      1270       1280       1290       1300       1310       1320 
QTGASSRKRS RSDRAVTGPS AQHSFEVRVP EQRDALHLPL SWRVKRPRTR IGGGLPDPGT 

      1330       1340       1350       1360       1370 
PIAADLAASS TVMWEQDAAP FAGAADDFPA FNEEELAWLM ELLPQSGSVG GTI

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A." Salzberg S.L., Sommer D.D., Schatz M.C., Phillippy A.M., Rabinowicz P.D., Tsuge S., Furutani A., Ochiai H., Delcher A.L., Kelley D., Madupu R., Puiu D., Radune D., Shumway M., Trapnell C., Aparna G., Jha G., Pandey A. Bogdanove A.J. BMC Genomics 9:204-204(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PXO99A EMBL ACD58243.2.
[2]	"The crystal structure of TAL effector PthXo1 bound to its DNA target." Mak A.N., Bradley P., Cernadas R.A., Bogdanove A.J., Stoddard B.L. Science 335:716-719(2012) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (3.00 ANGSTROMS) OF 21-1043.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

CP000967 Genomic DNA. Translation: ACD58243.2.

RefSeq

YP_001912775.1. NC_010717.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3UGM	X-ray	3.00	A	21-1043	[»]

ModBase

Protein-protein interaction databases

STRING

360094.PXO_00227.

Protocols and materials databases

StructuralBiologyKnowledgebase

Genome annotation databases

EnsemblBacteria

ACD58243; ACD58243; PXO_00227.

GeneID

KEGG

PATRIC

24122580. VBIXanOry73153_1663.

Organism-specific databases

CMR

Phylogenomic databases

HOGENOM

OMA

OrthoDB

ProtClustDB

Enzyme and pathway databases

BioCyc

XORY360094:GI45-1609-MONOMER.

Family and domain databases

InterPro

IPR005042. Avirulence_PthA-rel_XANspp.
[Graphical view]

Pfam

PF03377. Avirulence. 3 hits.
[Graphical view]

ProtoNet

Entry information

Entry name

B2SU53_XANOP

Accession

Primary (citable) accession number: B2SU53

Entry history

Integrated into UniProtKB/TrEMBL:	July 1, 2008
Last sequence update:	October 16, 2013
Last modified:	November 13, 2013
This is version 30 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

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Names·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info