B2SSS7 (B2SSS7_XANOP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Beta-galactosidase RuleBase RU000675
EC=3.2.1.23 RuleBase RU000675

Gene names

Ordered Locus Names:

PXO_01626

Organism

Xanthomonas oryzae pv. oryzae (strain PXO99A) [Complete proteome] [HAMAP]

Taxonomic identifier

360094 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas

Protein attributes

Sequence length	613 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. RuleBase RU000675
Sequence similarities	Belongs to the glycosyl hydrolase 35 family. RuleBase RU003679

Ontologies

Keywords
Molecular function	Glycosidase RuleBase RU000675 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	beta-galactosidase activity Inferred from electronic annotation. Source: EC cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B2SSS7 [UniParc]. Last modified July 1, 2008. Version 1. Checksum: 37552F0AFF92EB68	FASTA	613	67,507
	10 20 30 40 50 60 MLRTTLAPLV LALAFALPVT AAAADTERWP DFGTQGTQFV RDGKPYQLLS GAIHFQRIPR 70 80 90 100 110 120 AYWKDRLQKA RALGLNTVET YVFWNLVEPQ QGQFDFSGNN DVAAFVQEAA AQGLNVILRP 130 140 150 160 170 180 GPYACAEWEA GGYPAWLFGQ GNIRVRSRDP RFLAASQAYL DAVAKQVQPL LNHNGGPIIA 190 200 210 220 230 240 VQVENEYGSY ADDHAYMADN RAMYVKAGFD KALLFTSDGA DMLANGTLPD TLAVVNFAPG 250 260 270 280 290 300 EAKSAFDKLI AFRPDQPRMV GEYWAGWFDH WGKPHAATDA TQQAEEFEWI LRQGHSANLY 310 320 330 340 350 360 MFIGGTSFGF MNGANFQNNP SDHYAPQTTS YDYDAIVDEA GRPTAKFALM RDAIARVTGV 370 380 390 400 410 420 QPPALPAPIA TTTLPDTPLR ESASLWDNLP APIAIDTPQP MEHFGQDYGY ILYRTTVTGP 430 440 450 460 470 480 RKGPLYLGDV RDVAHVYLDQ TPVGSVERRL QQVSTAVDIP AGHHTLDVLV ENSGRINYGP 490 500 510 520 530 540 RMADGRAGLV DPVLLGNQQV TGWQAFPLPM RAPDSIRGWT RKAVQGPAFH RGTVRIGTPA 550 560 570 580 590 600 DTYLDMRAFG KGFAWANGVN LGRHWNIGPQ TALYFPAPFQ RKGDNTVVVF DLDDVATPSV 610 RGLKQQVWRK PKE

References

[1]

"Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A." Salzberg S.L., Sommer D.D., Schatz M.C., Phillippy A.M., Rabinowicz P.D., Tsuge S., Furutani A., Ochiai H., Delcher A.L., Kelley D., Madupu R., Puiu D., Radune D., Shumway M., Trapnell C., Aparna G., Jha G., Pandey A. , Patil P.B., Ishihara H., Meyer D.F., Szurek B., Verdier V., Koebnik R., Dow J.M., Ryan R.P., Hirata H., Tsuyumu S., Won Lee S., Seo Y.-S., Sriariyanum M., Ronald P.C., Sonti R.V., Van Sluys M.-A., Leach J.E., White F.F., Bogdanove A.J. BMC Genomics 9:204-204(2008) [PubMed: 18452608] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000967 Genomic DNA. Translation: ACD59766.1.
RefSeq	YP_001914298.1. NC_010717.1.
3D structure databases
ProteinModelPortal	B2SSS7.
ModBase	Search...
Protein-protein interaction databases
STRING	B2SSS7.
Protein family/group databases
CAZy	GH35. Glycoside Hydrolase Family 35.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6306688.
GenomeReviews	Gene locus PXO_01626 in contig CP000967_GR.
KEGG	xop:PXO_01626.
PATRIC	24125803. VBIXanOry73153_3258.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG292753.
OMA	ENMGRVS.
ProtClustDB	CLSK881272.
Enzyme and pathway databases
BioCyc	XORY360094:XOOORF_3238-MONOMER.
Family and domain databases
InterPro	IPR008979. Galactose-bd-like. IPR019801. Glyco_hydro_35_CS. IPR013781. Glyco_hydro_subgr_catalytic. IPR001944. Glycoside_Hdrlase_35. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K12308.
PANTHER	PTHR23421. Glyco_hydro_35. 1 hit.
Pfam	PF01301. Glyco_hydro_35. 1 hit. [Graphical view]
PRINTS	PR00742. GLHYDRLASE35.
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS01182. GLYCOSYL_HYDROL_F35. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B2SSS7_XANOP

Accession

Primary (citable) accession number: B2SSS7

Entry history

Integrated into UniProtKB/TrEMBL:	July 1, 2008
Last sequence update:	July 1, 2008
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)