B2SSM4 (B2SSM4_XANOP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
L-serine ammonia-lyase EMBL ACD59713.1

Gene names

Name:	sdaA EMBL ACD59713.1
Ordered Locus Names:	PXO_01684

Organism

Xanthomonas oryzae pv. oryzae (strain PXO99A) [Complete proteome] [HAMAP]

Taxonomic identifier

360094 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas

Protein attributes

Sequence length	468 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL ACD59713.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	gluconeogenesis Inferred from electronic annotation. Source: InterPro
Molecular function	4 iron, 4 sulfur cluster binding Inferred from electronic annotation. Source: InterPro L-serine ammonia-lyase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B2SSM4 [UniParc]. Last modified July 1, 2008. Version 1. Checksum: FE0B2D737E71A88E	FASTA	468	50,650
	10 20 30 40 50 60 MTLTSPARMA VSTFDLFKIG IGPSSSHTVG PMRAAERFVH RWLLDAGRLQ DVMRLRAEVF 70 80 90 100 110 120 GSLALTGRGH GTDKAVLLGL EGHRPNLIDP DIIPAVLERI RTSKRISLMG QHEISFEEKR 130 140 150 160 170 180 DLPMNKRQKL PYHTNGMRFT AYDADEGVIA TRDYYSVGGG FVVNQDDAAD DRIVADETPL 190 200 210 220 230 240 PYPFFSGDEL LAQCARSGLS IAALIFENEK SWRSEDEIRA GLREVWKAMQ SCVERGIRQE 250 260 270 280 290 300 GTLPGSLNVS RRAPALYREL SSKPEAAMRD PLTTLDWVNL YALAVNEENA AGGRVVTAPT 310 320 330 340 350 360 NGAAGIIPAV LHYFDRFCAG ASEQRIFDFL LTAAAIGILY KENASISGAE VGCQGEVGVA 370 380 390 400 410 420 CSMAAGGLVA ALGGNPGQIE NAAEIGMEHN LGLTCDPIGG LVQIPCIERN AMGAVKAINA 430 440 450 460 SRMAMRGDGK HKVSLDKVIK TMRDTGRDMQ DKYKETSRGG LAVNVIEC

References

[1]

"Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A." Salzberg S.L., Sommer D.D., Schatz M.C., Phillippy A.M., Rabinowicz P.D., Tsuge S., Furutani A., Ochiai H., Delcher A.L., Kelley D., Madupu R., Puiu D., Radune D., Shumway M., Trapnell C., Aparna G., Jha G., Pandey A. , Patil P.B., Ishihara H., Meyer D.F., Szurek B., Verdier V., Koebnik R., Dow J.M., Ryan R.P., Hirata H., Tsuyumu S., Won Lee S., Seo Y.-S., Sriariyanum M., Ronald P.C., Sonti R.V., Van Sluys M.-A., Leach J.E., White F.F., Bogdanove A.J. BMC Genomics 9:204-204(2008) [PubMed: 18452608] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000967 Genomic DNA. Translation: ACD59713.1.
RefSeq	YP_001914245.1. NC_010717.1.
3D structure databases
ProteinModelPortal	B2SSM4.
ModBase	Search...
Protein-protein interaction databases
STRING	B2SSM4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6306634.
GenomeReviews	Gene locus PXO_01684 in contig CP000967_GR.
KEGG	xop:PXO_01684.
PATRIC	24125695. VBIXanOry73153_3204.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG304565.
OMA	CAGASEQ.
ProtClustDB	CLSK451625.
Enzyme and pathway databases
BioCyc	XORY360094:XOOORF_3181-MONOMER.
Family and domain databases
InterPro	IPR004644. Fe-S_L-Ser_mono. IPR005130. Ser_deHydtase-like_asu. IPR005131. Ser_deHydtase_bsu. [Graphical view]
KO	K01752.
Pfam	PF03313. SDH_alpha. 1 hit. PF03315. SDH_beta. 1 hit. [Graphical view]
TIGRFAMs	TIGR00720. Sda_mono. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B2SSM4_XANOP

Accession

Primary (citable) accession number: B2SSM4

Entry history

Integrated into UniProtKB/TrEMBL:	July 1, 2008
Last sequence update:	July 1, 2008
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)