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B2SRV8

- B2SRV8_XANOP

UniProt

B2SRV8 - B2SRV8_XANOP

Protein
Submitted name:

DNA ligase

Gene

PXO_01736

Organism
Xanthomonas oryzae pv. oryzae (strain PXO99A)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 44 (01 Oct 2014)
      Sequence version 1 (01 Jul 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciXORY360094:GI45-3062-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligaseImported
    Gene namesi
    Ordered Locus Names:PXO_01736Imported
    OrganismiXanthomonas oryzae pv. oryzae (strain PXO99A)Imported
    Taxonomic identifieri360094 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
    ProteomesiUP000001740: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi360094.PXO_01736.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiELRIWIA.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B2SRV8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKRFAALYRT LDRSTGTLDK RAALVAYFRD APALDAAWAL YLLAGGKVAS    50
    ARMHIAGSGE LREWITDTAG IADWLVADSY DHVGDLAETL ALLLDDPVTE 100
    AADLPLAEWI EQRLLPIANK DVEVRKACIV QAWRSLAFDE RLVFNKLLTG 150
    ALRVGVSQRL VQQALAELSG MDTARIAQRM LGSWRPHPTY LAELLTSEEL 200
    PGDRQQPYPF FLASPLEAEV QTLGAIDDWL LEWKWDGIRL QLIRRAGEAA 250
    LWSRGEERLD GRFPEIEHAA LQLPDGTVID GELLAWQPEQ SLPMPFTALQ 300
    TRIQRLKPGP KTLTAAPARV VAYDLLELDG ADLRGRPLQE RRALLEGVLT 350
    TLADPRIVAS PLVQVSDWHA AAQVRVEARE RGVEGLMLKR AGSVYQSGRR 400
    RGDWWKWKID PLTIDAVLLY AQAGHGRRST LYTDYTFGLW HEGQLVPIAK 450
    AYSGLDDSEI LQLDRWIRAN TTERFGPVRA VTAHHVFELG FEAVNRSARH 500
    KSGIAVRFPR ILRWRQDKPM ADADHLSSLQ ALAR 534
    Length:534
    Mass (Da):59,832
    Last modified:July 1, 2008 - v1
    Checksum:iD0A17A1F11E65B02
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000967 Genomic DNA. Translation: ACD59660.1.
    RefSeqiYP_001914192.1. NC_010717.1.

    Genome annotation databases

    EnsemblBacteriaiACD59660; ACD59660; PXO_01736.
    GeneIDi6306581.
    KEGGixop:PXO_01736.
    PATRICi24125589. VBIXanOry73153_3151.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000967 Genomic DNA. Translation: ACD59660.1 .
    RefSeqi YP_001914192.1. NC_010717.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 360094.PXO_01736.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACD59660 ; ACD59660 ; PXO_01736 .
    GeneIDi 6306581.
    KEGGi xop:PXO_01736.
    PATRICi 24125589. VBIXanOry73153_3151.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi ELRIWIA.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci XORY360094:GI45-3062-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PXO99AImported.

    Entry informationi

    Entry nameiB2SRV8_XANOP
    AccessioniPrimary (citable) accession number: B2SRV8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 1, 2008
    Last sequence update: July 1, 2008
    Last modified: October 1, 2014
    This is version 44 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3