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B2SKT9 (B2SKT9_XANOP) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Probable alpha-L-glutamate ligase HAMAP-Rule MF_01552

EC=6.3.2.- HAMAP-Rule MF_01552
Gene names
Name:rimK HAMAP-Rule MF_01552
Ordered Locus Names:PXO_02302 EMBL ACD60597.1
OrganismXanthomonas oryzae pv. oryzae (strain PXO99A) [Complete proteome] [HAMAP] EMBL ACD60597.1
Taxonomic identifier360094 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas

Protein attributes

Sequence length305 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 2 magnesium or manganese ions per subunit By similarity. HAMAP-Rule MF_01552 SAAS SAAS013651

Sequence similarities

Belongs to the RimK family. HAMAP-Rule MF_01552

Contains 1 ATP-grasp domain. HAMAP-Rule MF_01552

Contains ATP-grasp domain. SAAS SAAS013651

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Domain114 – 297184ATP-grasp By similarity HAMAP-Rule MF_01552
Nucleotide binding141 – 19656ATP By similarity HAMAP-Rule MF_01552
Nucleotide binding188 – 1892ATP By similarity HAMAP-Rule MF_01552
Nucleotide binding221 – 2233ATP By similarity HAMAP-Rule MF_01552

Sites

Metal binding2581Magnesium or manganese 1 By similarity HAMAP-Rule MF_01552
Metal binding2701Magnesium or manganese 1 By similarity HAMAP-Rule MF_01552
Metal binding2701Magnesium or manganese 2 By similarity HAMAP-Rule MF_01552
Metal binding2721Magnesium or manganese 2 By similarity HAMAP-Rule MF_01552
Binding site1511ATP By similarity HAMAP-Rule MF_01552
Binding site1971ATP By similarity HAMAP-Rule MF_01552

Sequences

Sequence LengthMass (Da)Tools
B2SKT9 [UniParc].

Last modified July 1, 2008. Version 1.
Checksum: 0C8EE7692D9DC699

FASTA30532,771
        10         20         30         40         50         60 
MSKPRRVPAA MKIAILSRNS KLYSTRRLIE AGRKRGHTVR ILDPLRCYMR IAADGFSLHY 

        70         80         90        100        110        120 
KGKPITGFDA VIPRIGASVT RYGTAVLRQL EFMGTYTPNP SDAILRARDK LRAHQLLAAQ 

       130        140        150        160        170        180 
GIDMPVTVFG DNPDDTQDLL SMLGPPPHVV KLNEGAQGAG VILTEKASAS RSVVEALRGL 

       190        200        210        220        230        240 
YANFIVQEFI GEAEGADLRC FVVGDRVVAA MRRQAAEGDF RSNLHLGGTA VVADATELER 

       250        260        270        280        290        300 
EVAVRSARAL GLAVAGVDLI RSKRGPLVLE VNSTPGLEGV EGVCGVDVAG AIVQHLEQSV 


RRSAD 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000967 Genomic DNA. Translation: ACD60597.1.
RefSeqYP_001915129.1. NC_010717.1.

3D structure databases

ProteinModelPortalB2SKT9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING360094.PXO_02302.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACD60597; ACD60597; PXO_02302.
GeneID6307543.
KEGGxop:PXO_02302.
PATRIC24127611. VBIXanOry73153_4155.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0189.
HOGENOMHOG000293092.
KOK05844.
OMACREPRLY.
OrthoDBEOG6DZDX8.
ProtClustDBCLSK451700.

Enzyme and pathway databases

BioCycXORY360094:GI45-4024-MONOMER.

Family and domain databases

Gene3D3.30.1490.20. 1 hit.
3.30.470.20. 1 hit.
3.40.50.20. 1 hit.
HAMAPMF_01552. RimK.
InterProIPR011761. ATP-grasp.
IPR013651. ATP-grasp_RimK-type.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR016185. PreATP-grasp_dom.
IPR023533. Ribosomal_S6_modifier_RimK.
IPR004666. RpS6_RimK/Lys_biosynth_LsyX.
[Graphical view]
PfamPF08443. RimK. 1 hit.
[Graphical view]
TIGRFAMsTIGR00768. rimK_fam. 1 hit.
PROSITEPS50975. ATP_GRASP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2SKT9_XANOP
AccessionPrimary (citable) accession number: B2SKT9
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: April 16, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)