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B2SKD3 (B2SKD3_XANOP) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:PXO_03994 EMBL ACD57270.1
OrganismXanthomonas oryzae pv. oryzae (strain PXO99A) [Complete proteome] [HAMAP] EMBL ACD57270.1
Taxonomic identifier360094 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas

Protein attributes

Sequence length743 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Cofactor

Binds 1 magnesium or manganese ion per subunit By similarity. PIRSR PIRSR009407-3

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region133 – 1408Substrate binding By similarity

Sites

Metal binding3511Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5491Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5531Magnesium or manganese By similarity PIRSR PIRSR009407-3
Binding site1461Substrate By similarity
Binding site5481Substrate By similarity PIRSR PIRSR009407-2
Site2561Critical for catalysis By similarity PIRSR PIRSR009407-1
Site4211Critical for catalysis By similarity PIRSR PIRSR009407-1

Sequences

Sequence LengthMass (Da)Tools
B2SKD3 [UniParc].

Last modified July 1, 2008. Version 1.
Checksum: 818A13A1CED92798

FASTA74380,342
        10         20         30         40         50         60 
MPNTPKILYT LTDEAPYLAT QSLLPIIDAY TDTAGIVVET RDISLAGRIL ALFPEYLSDT 

        70         80         90        100        110        120 
QKVADDLGEL GELATTPEAN IIKLPNISAS VPQLKAAIKE LQGQGYALPA YPDEPKDAAE 

       130        140        150        160        170        180 
KDIKARYDKV KGSAVNPVLR EGNSDRRAPL SVKNYARKHP HRMGKWSSDS KSHVSHMESG 

       190        200        210        220        230        240 
DFFGSEQSTT LADAGTLKIE FVGADGSSTV LKDKVAVKAG EIVDAAVLSK RALASFIDAQ 

       250        260        270        280        290        300 
IADAKARDVL FSVHLKATMM KVSDPVLFGV VVGEFYKDTL SRHADALKSV GFDPNNGIGD 

       310        320        330        340        350        360 
LYARIGTLPE DQQARIKADI QAEYAQRPGL AMVNSDKGIT NLHVPSDVIV DASMPAMIRD 

       370        380        390        400        410        420 
SGQMWNAQGT LQDTKAVIPD RCYADVYQAV IDDCKAHGAF DPSTMGSVPN VGLMAQKAEE 

       430        440        450        460        470        480 
YGSHDKTFQM AAAGTVKVTD GNGKTVFKHA VEAGDLWRMC QVKDAPIQDW VKLAVERARL 

       490        500        510        520        530        540 
SDTPAVFWLD QARAHDAQVI AKVEQYLKDH DTNGLDIRIL PPVEATAFSL ERIRKGQDTI 

       550        560        570        580        590        600 
SVTGNVLRDY LTDLFPIMEL GTSAKMLSIV PLMAGGGLFE TGAGGSAPKH VQQFVEENCL 

       610        620        630        640        650        660 
RWDSLGEFLA LAASLEHLGN RYDNPSATVL AKALDVANGQ FLDNNKSPAR KVGELDNRGS 

       670        680        690        700        710        720 
HFYLAMYWAQ ALAAQTEDTA LQGRFAPLAR ALTENEATIV AELNGAQGKP VDIGGYYHPD 

       730        740 
LAKVSEAMRP SKTFNDILAT LKA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000967 Genomic DNA. Translation: ACD57270.1.
RefSeqYP_001911802.1. NC_010717.1.

3D structure databases

ProteinModelPortalB2SKD3.
SMRB2SKD3. Positions 4-741.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING360094.PXO_03994.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACD57270; ACD57270; PXO_03994.
GeneID6304135.
KEGGxop:PXO_03994.
PATRIC24120514. VBIXanOry73153_0639.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2838.
HOGENOMHOG000240860.
KOK00031.
OMAARFDKIK.
OrthoDBEOG6DVJPP.

Enzyme and pathway databases

BioCycXORY360094:GI45-616-MONOMER.

Family and domain databases

Gene3D3.40.718.10. 3 hits.
InterProIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamPF03971. IDH. 1 hit.
[Graphical view]
PIRSFPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsTIGR00178. monomer_idh. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB2SKD3_XANOP
AccessionPrimary (citable) accession number: B2SKD3
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: July 9, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)