B2SIF8 (B2SIF8_XANOP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Xylosidase; arabinosidase EMBL ACD57019.1

Gene names

Ordered Locus Names:

PXO_03855

Organism

Xanthomonas oryzae pv. oryzae (strain PXO99A) [Complete proteome] [HAMAP]

Taxonomic identifier

360094 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas

Protein attributes

Sequence length	556 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B2SIF8 [UniParc]. Last modified July 1, 2008. Version 1. Checksum: 1A18BA700F9A4F1F	FASTA	556	60,394
	10 20 30 40 50 60 MLIALAAPAT AQAQASADVA FDWFDYRGDD AVFATSLPAG DYRNPILAGF YPDPSITQVG 70 80 90 100 110 120 NHYYLVNSTF TYFPAIPVFQ STDLVHWTQI GNVVERTDQL NYDGLEVSRG MFAPTIRYHN 130 140 150 160 170 180 GRYYVVGTSA DNGGNFIASA SNPAGPWSAL SWLPGIDGID LSLFFDTDGS GYLLNNGPPE 190 200 210 220 230 240 GTPQYEGHRA IWMQRFDLAS NQPVGPRKVL LDRGVDPSSK PIWIEAPHLY QRNGWYYLSC 250 260 270 280 290 300 AEGGTLPDQQ HRQVVLRSRH VWGPYASAPN NPILSQNALP AGRAHPVINA GHADFVTTPD 310 320 330 340 350 360 GQWWAVFLAA RPYAGDRYNT GRETFLLPVQ WRDDWPSILP AGAPIPTIAK APALAAAASD 370 380 390 400 410 420 QAPLSGNFTW HDDFDTSTLR RAWLFLRVPH QPLADLNTRT GWLTLHAGSQ GLDGTGTPAF 430 440 450 460 470 480 LARRQQHTRF TASTALAVPI QSGVSGGLAA FQNASAWYAL GVRRDGDGLE VFLDKRDGAQ 490 500 510 520 530 540 TSTLAHTHVA LTTQVRLQIS GDGGAYGFAF DADGRGWQVL RRDDDAGMLS TAQAGGFVGT 550 MIGPFAQLQP ARPKED

References

[1]

"Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A." Salzberg S.L., Sommer D.D., Schatz M.C., Phillippy A.M., Rabinowicz P.D., Tsuge S., Furutani A., Ochiai H., Delcher A.L., Kelley D., Madupu R., Puiu D., Radune D., Shumway M., Trapnell C., Aparna G., Jha G., Pandey A. , Patil P.B., Ishihara H., Meyer D.F., Szurek B., Verdier V., Koebnik R., Dow J.M., Ryan R.P., Hirata H., Tsuyumu S., Won Lee S., Seo Y.-S., Sriariyanum M., Ronald P.C., Sonti R.V., Van Sluys M.-A., Leach J.E., White F.F., Bogdanove A.J. BMC Genomics 9:204-204(2008) [PubMed: 18452608] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000967 Genomic DNA. Translation: ACD57019.1.
RefSeq	YP_001911551.1. NC_010717.1.
3D structure databases
ProteinModelPortal	B2SIF8.
ModBase	Search...
Protein-protein interaction databases
STRING	B2SIF8.
Protein family/group databases
CAZy	GH43. Glycoside Hydrolase Family 43.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6303877.
GenomeReviews	Gene locus PXO_03855 in contig CP000967_GR.
KEGG	xop:PXO_03855.
PATRIC	24119958. VBIXanOry73153_0363.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG347235.
OMA	PIWIEAP.
ProtClustDB	CLSK753085.
Enzyme and pathway databases
BioCyc	XORY360094:XOOORF_0365-MONOMER.
Family and domain databases
InterPro	IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. IPR006710. Glyco_hydro_43. IPR023296. Glyco_hydro_43_beta-prop. [Graphical view]
Gene3D	G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit. G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
KO	K01198. K01209.
PANTHER	PTHR22925. Glyco_hydro_43. 1 hit.
Pfam	PF04616. Glyco_hydro_43. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit. SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B2SIF8_XANOP

Accession

Primary (citable) accession number: B2SIF8

Entry history

Integrated into UniProtKB/TrEMBL:	July 1, 2008
Last sequence update:	July 1, 2008
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)