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Protein

UPF0176 protein FTM_1229

Gene

FTM_1229

Organism
Francisella tularensis subsp. mediasiatica (strain FSC147)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei177Cysteine persulfide intermediateUniRule annotation1

Enzyme and pathway databases

BioCyciFTUL441952:GIY0-1047-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0176 protein FTM_1229UniRule annotation
Gene namesi
Ordered Locus Names:FTM_1229
OrganismiFrancisella tularensis subsp. mediasiatica (strain FSC147)
Taxonomic identifieri441952 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaThiotrichalesFrancisellaceaeFrancisella

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10002003621 – 328UPF0176 protein FTM_1229Add BLAST328

Structurei

3D structure databases

ProteinModelPortaliB2SH90.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini123 – 217RhodaneseUniRule annotationAdd BLAST95

Sequence similaritiesi

Belongs to the UPF0176 family.UniRule annotation
Contains 1 rhodanese domain.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000034808.
KOiK07146.
OMAiDHKESYC.

Family and domain databases

Gene3Di3.40.250.10. 1 hit.
HAMAPiMF_00469. UPF0176. 1 hit.
InterProiIPR001763. Rhodanese-like_dom.
IPR020936. UPF0176.
[Graphical view]
PfamiPF00581. Rhodanese. 1 hit.
[Graphical view]
SMARTiSM00450. RHOD. 1 hit.
[Graphical view]
SUPFAMiSSF52821. SSF52821. 1 hit.
PROSITEiPS50206. RHODANESE_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B2SH90-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQIVVCAMY KFVTLEDFEA MRQPLLDTMI KNNVKGTLLL ANEGINGTVA
60 70 80 90 100
GTRESIDNLL AYLKADPRLV DIDYKESYHQ EMPFYRSKVK LKKEIVTLGI
110 120 130 140 150
DEIDPNKICG KYVEPKDWND LISDPETVLI DTRNEYEIEI GTFKNAINPH
160 170 180 190 200
TENFREFPQY VDENLDPKKH KKVAMFCTGG IRCEKSTALL KAKGFDEVYH
210 220 230 240 250
LKGGILKYLE EVPKEKSMWQ GECFVFDSRV AVNHDLEKGN YDQCFACRMP
260 270 280 290 300
ITEDDKKRPE YVKGISCHHC YDKVTEKQKA RFAEREKQSQ LAAEKGFSHV
310 320
GDEAKKLAQL NKQKKQQAKE AARKKAQQ
Length:328
Mass (Da):37,761
Last modified:July 1, 2008 - v1
Checksum:i636BA78107F58ABF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000915 Genomic DNA. Translation: ACD31098.1.
RefSeqiWP_003016080.1. NC_010677.1.

Genome annotation databases

EnsemblBacteriaiACD31098; ACD31098; FTM_1229.
KEGGiftm:FTM_1229.
PATRICi17957290. VBIFraTul67519_1531.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000915 Genomic DNA. Translation: ACD31098.1.
RefSeqiWP_003016080.1. NC_010677.1.

3D structure databases

ProteinModelPortaliB2SH90.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACD31098; ACD31098; FTM_1229.
KEGGiftm:FTM_1229.
PATRICi17957290. VBIFraTul67519_1531.

Phylogenomic databases

HOGENOMiHOG000034808.
KOiK07146.
OMAiDHKESYC.

Enzyme and pathway databases

BioCyciFTUL441952:GIY0-1047-MONOMER.

Family and domain databases

Gene3Di3.40.250.10. 1 hit.
HAMAPiMF_00469. UPF0176. 1 hit.
InterProiIPR001763. Rhodanese-like_dom.
IPR020936. UPF0176.
[Graphical view]
PfamiPF00581. Rhodanese. 1 hit.
[Graphical view]
SMARTiSM00450. RHOD. 1 hit.
[Graphical view]
SUPFAMiSSF52821. SSF52821. 1 hit.
PROSITEiPS50206. RHODANESE_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiY1229_FRATM
AccessioniPrimary (citable) accession number: B2SH90
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: July 1, 2008
Last modified: November 2, 2016
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.