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B2SGM6 (DCD_FRATM) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Deoxycytidine triphosphate deaminase

Short name=dCTP deaminase
EC=3.5.4.13
Gene names
Name:dcd
Ordered Locus Names:FTM_0956
OrganismFrancisella tularensis subsp. mediasiatica (strain FSC147) [Complete proteome] [HAMAP]
Taxonomic identifier441952 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaThiotrichalesFrancisellaceaeFrancisella

Protein attributes

Sequence length188 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Ontologies

Keywords
   Biological processNucleotide metabolism
   Molecular functionHydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processdUMP biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

dUTP biosynthetic process

Inferred from electronic annotation. Source: InterPro

pyrimidine ribonucleotide biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functiondCTP deaminase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 188188Deoxycytidine triphosphate deaminase HAMAP-Rule MF_00146
PRO_1000096427

Sequences

Sequence LengthMass (Da)Tools
B2SGM6 [UniParc].

Last modified July 1, 2008. Version 1.
Checksum: 1A5A0DED9DB5D449

FASTA18821,124
        10         20         30         40         50         60 
MTIKSDKWIK KMSQEHNMIE PFEAGQVKVI NNQKIVSYGT SSYGYDVRCA DEFKIFTNIN 

        70         80         90        100        110        120 
SSIVDPKNFN DKNFVDFKGD VCIIPPNSFA LARTVEKFKI PRDTLVVCLG KSTYARCGII 

       130        140        150        160        170        180 
VNVTPLEPEW EGYVTLEFSN TTPLPAKIYA NEGVAQMLFF QSDEECETSY ADKGGKYQGQ 


VGVTLPKC 

« Hide

References

[1]"Molecular evolutionary consequences of niche restriction in Francisella tularensis, a facultative intracellular pathogen."
Larsson P., Elfsmark D., Svensson K., Wikstroem P., Forsman M., Brettin T., Keim P., Johansson A.
PLoS Pathog. 5:E1000472-E1000472(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: FSC147.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000915 Genomic DNA. Translation: ACD30885.1.
RefSeqYP_001891663.1. NC_010677.1.

3D structure databases

ProteinModelPortalB2SGM6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING441952.FTM_0956.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACD30885; ACD30885; FTM_0956.
GeneID6290482.
KEGGftm:FTM_0956.
PATRIC17956600. VBIFraTul67519_1197.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0717.
HOGENOMHOG000228600.
KOK01494.
OMAMEYFRIP.
OrthoDBEOG67DPKR.
ProtClustDBPRK00416.

Enzyme and pathway databases

BioCycFTUL441952:GIY0-955-MONOMER.
UniPathwayUPA00610; UER00665.

Family and domain databases

HAMAPMF_00146. dCTP_deaminase.
InterProIPR011962. dCTP_deam.
IPR008180. dUTP_pyroPase.
[Graphical view]
PfamPF00692. dUTPase. 1 hit.
[Graphical view]
TIGRFAMsTIGR02274. dCTP_deam. 1 hit.
ProtoNetSearch...

Entry information

Entry nameDCD_FRATM
AccessionPrimary (citable) accession number: B2SGM6
Entry history
Integrated into UniProtKB/Swiss-Prot: March 24, 2009
Last sequence update: July 1, 2008
Last modified: February 19, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways