B2SB76 (B2SB76_BRUA1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Mfd, transcription-repair coupling factor EMBL ACD74113.1

Gene names

Ordered Locus Names:

BAbS19_II06180

Organism

Brucella abortus (strain S19) [Complete proteome] [HAMAP] EMBL ACD74113.1

Taxonomic identifier

430066 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Brucellaceae › Brucella › Brucella abortus

Protein attributes

Sequence length	1170 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Ligand	ATP-binding Nucleotide-binding
Molecular function	Helicase RuleBase RU000452 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATP-dependent helicase activity Inferred from electronic annotation. Source: InterPro damaged DNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B2SB76 [UniParc]. Last modified July 1, 2008. Version 1. Checksum: FB8F18E87F8B78D2	FASTA	1,170	128,288
	10 20 30 40 50 60 MPVFSKLGLK PGAIANKGRH IVIDGVADGF EAFCLARLVE EIGERGPIMY IVRDGQRIAD 70 80 90 100 110 120 LEQVLGFVSP DLPVLHLPAW DCLPYDRVSP GADAAARRLA ALSALCALKK APHPAVILTT 130 140 150 160 170 180 SNAVLQKLPP QAALGEQVIS ARPGNQLDMN DLAARLERNG FERVSTVRDI GEYAVRGGIL 190 200 210 220 230 240 DLYAPGAEEP LRLDFFGDTL ETIRAFDPAS QRTTGTRKEF VLQPMSEITL SSDMISRFRK 250 260 270 280 290 300 NYVAMFGAPQ RDDALYQAIS EGRRFAGMEH WLPLFYDNLE TVFDHAGPMP VVFDHLVHEA 310 320 330 340 350 360 LTERHTMVVD HYEARLRQAE GKEAGSDAVP YKPVKPEMLY LTPGQVEEAA EAAGLRIDLT 370 380 390 400 410 420 PFGAPEVSGR TIIHADVHKG RSFAEERAAT DVNLFEAVVK HIADLRASGK KVLVAAWTEG 430 440 450 460 470 480 SLDRLCQVLD EHGLEKIETV DRLSTVKALS RDKVTAAVLA VESGFDAGDL VVVAEQDILG 490 500 510 520 530 540 DRLIRRSRRR KRDQDFISEV ASLTAGDIVV HVDHGIGRFI GLKTITAAGA PHDCLEIHYA 550 560 570 580 590 600 GDDRLFLPVE NIELLSRYGS EGSDAVLDKL GGGAWQARKA KLKKRLLEIA GHLIQIAAER 610 620 630 640 650 660 QMRGAPVMTP PDGLYAEFAA RFPYDETDDQ LTAIEAVADD LAQGKPMDRL ICGDVGFGKT 670 680 690 700 710 720 EVALRAAFIA AMSGVQVAVV VPTTLLSRQH FKTFSNRFHG LPINVAHASR LVGAKGLAAT 730 740 750 760 770 780 KKGLEEGTVD IVVGTHALLG SSIKFKNLGL LIIDEEQHFG VKHKERLKEL KSDVHVLTLS 790 800 810 820 830 840 ATPIPRTLQL ALTGVRELSL ITTPPVDRMA VRTFVSPFDP LVIRETLLRE RYRGGQSFYV 850 860 870 880 890 900 VPRIADLTDI EEFLKEHVPE LKVAVAHGQM APGVLDDIMN AFYDGQYDVL LSTTIVESGL 910 920 930 940 950 960 DIPTANTMIV HRADMFGLAQ LYQLRGRVGR SKQRAFALFT LPAGKMLTQM AERRLKVLQS 970 980 990 1000 1010 1020 LDTLGAGFQL ASHDMDIRGA GNLLGEEQSG HIKEVGFELY QQMLEEAVAT LKGSGEVEDS 1030 1040 1050 1060 1070 1080 QWSPQIAIGT AVMIPEAYVP DLQLRLGLYR RLADLEEPQD IDAFGAELID RFGPMPDEVQ 1090 1100 1110 1120 1130 1140 HLLKIVYIKA LCRRANVEKL DAGPKGVVIQ FRHATFNNPV GLVKMIGEQG SMAKIRPDQS 1150 1160 1170 IVFIRDWPTP EKRLNGSAVI MTQLAKIAAA

References

[1]

"Genome sequence of Brucella abortus vaccine strain S19 compared to virulent strains yields candidate virulence genes." Crasta O.R., Folkerts O., Fei Z., Mane S.P., Evans C., Martino-Catt S., Bricker B., Yu G., Du L., Sobral B.W. PLoS ONE 3:E2193-E2193(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: S19.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000888 Genomic DNA. Translation: ACD74113.1.
RefSeq	YP_001932559.1. NC_010740.1.
3D structure databases
ProteinModelPortal	B2SB76.
ModBase	Search...
Protein-protein interaction databases
STRING	430066.BAbS19_II06180.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACD74113; ACD74113; BAbS19_II06180.
GeneID	6326340.
KEGG	bmc:BAbS19_II06180.
PATRIC	17815759. VBIBruAbo38055_0679.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1197.
HOGENOM	HOG000216592.
KO	K03723.
OMA	QAYAYLM.
ProtClustDB	CLSK863099.
Enzyme and pathway databases
BioCyc	BABO430066:GHI6-2662-MONOMER.
Family and domain databases
InterPro	IPR003711. CarD-like/TRCF_domain. IPR011545. DNA/RNA_helicase_DEAD/DEAH_N. IPR014001. Helicase_ATP-bd. IPR001650. Helicase_C. IPR004576. Mfd. IPR005118. Tscpt_repair-coupling_fac_dom. [Graphical view]
Pfam	PF02559. CarD_CdnL_TRCF. 1 hit. PF00270. DEAD. 1 hit. PF00271. Helicase_C. 1 hit. PF03461. TRCF. 1 hit. [Graphical view]
SMART	SM01058. CarD_TRCF. 1 hit. SM00487. DEXDc. 1 hit. SM00490. HELICc. 1 hit. SM00982. TRCF. 1 hit. [Graphical view]
TIGRFAMs	TIGR00580. mfd. 1 hit.
PROSITE	PS51192. HELICASE_ATP_BIND_1. 1 hit. PS51194. HELICASE_CTER. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B2SB76_BRUA1

Accession

Primary (citable) accession number: B2SB76

Entry history

Integrated into UniProtKB/TrEMBL:	July 1, 2008
Last sequence update:	July 1, 2008
Last modified:	May 1, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)