B2S3R9 (GCP_TREPS) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp

Alternative name(s):
t(6)A37 threonylcarbamoyladenosine biosynthesis protein

Gene names

Name:	gcp
Ordered Locus Names:	TPASS_0680

Organism

Treponema pallidum subsp. pallidum (strain SS14) [Complete proteome] [HAMAP]

Taxonomic identifier

455434 [NCBI]

Taxonomic lineage

Bacteria › Spirochaetes › Spirochaetales › Spirochaetaceae › Treponema

Protein attributes

Sequence length	352 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t6A37) in tRNAs that read codons beginning with adenine By similarity. HAMAP MF_01445
Subcellular location	Cytoplasm Potential HAMAP MF_01445.
Sequence similarities	Belongs to the KAE1 / YgjD family.

Ontologies

Keywords
Biological process	tRNA processing
Cellular component	Cytoplasm
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	proteolysis Inferred from electronic annotation. Source: InterPro tRNA processing Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	metalloendopeptidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 352	352	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp HAMAP MF_01445		PRO_1000146037

Sequences

	Sequence		Length	Mass (Da)
	B2S3R9 [UniParc]. Last modified July 1, 2008. Version 1. Checksum: 7597553A6AAD8C2F	FASTA	352	38,132
	10 20 30 40 50 60 MNVLGIETSC DETAVAIVKD GTHVCSNVVA TQIPFHAPYR GIVPELASRK HIEWILPTVK 70 80 90 100 110 120 EALARAQLTL ADIDGIAVTH APGLTGSLLV GLTFAKTLAW SMHLPFIAVN HLHAHFCAAH 130 140 150 160 170 180 VEHDLAYPYV GLLASGGHAL VCVVHDFDQV EALGATIDDA PGEAFDKVAA FYGFGYPGGK 190 200 210 220 230 240 VIETLAEQGD ARAARFPLPH FHGKGHRYDV SYSGLKTAVI HQLDHFWNKE YERTAQNIAA 250 260 270 280 290 300 AFQACAINIL LRPLARALQD TGLPTAVVCG GVAANSLLRK SVADWKHARC VFPSREYCTD 310 320 330 340 350 NAVMVAALGY RYLIRGDRSF YGVTERSRIA HFSKRGGDRL AAQRSAASQP LF

References

[1]

"Complete genome sequence of Treponema pallidum ssp. pallidum strain SS14 determined with oligonucleotide arrays." Matejkova P., Strouhal M., Smajs D., Norris S.J., Palzkill T., Petrosino J.F., Sodergren E., Norton J.E., Singh J., Richmond T.A., Molla M.N., Albert T.J., Weinstock G.M. BMC Microbiol. 8:76-76(2008) [PubMed: 18482458] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SS14.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000805 Genomic DNA. Translation: ACD71098.1.
RefSeq	YP_001933677.1. NC_010741.1.
3D structure databases
ProteinModelPortal	B2S3R9.
ModBase	Search...
Protein-protein interaction databases
STRING	B2S3R9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6333316.
GenomeReviews	Gene locus TPASS_0680 in contig CP000805_GR.
KEGG	tpp:TPASS_0680.
PATRIC	20529135. VBITrePal10923_0720.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG304663.
OMA	PAVGVHH.
ProtClustDB	PRK09604.
Family and domain databases
HAMAP	MF_01445. gcp. [Tree]
InterPro	IPR022450. Pept_M22_O-sialoglycopept. IPR000905. Peptidase_M22. IPR017860. Peptidase_M22_CS. IPR017861. Peptidase_M22_subgr. [Graphical view]
KO	K01409.
Pfam	PF00814. Peptidase_M22. 1 hit. [Graphical view]
PRINTS	PR00789. OSIALOPTASE.
TIGRFAMs	TIGR03723. Bact_gcp. 1 hit. TIGR00329. Gcp_kae1. 1 hit.
PROSITE	PS01016. GLYCOPROTEASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

GCP_TREPS

Accession

Primary (citable) accession number: B2S3R9

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 14, 2009
Last sequence update:	July 1, 2008
Last modified:	January 25, 2012
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program