B2S1B0 (GCP_BORHD) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp

Alternative name(s):
t(6)A37 threonylcarbamoyladenosine biosynthesis protein

Gene names

Name:	gcp
Ordered Locus Names:	BH0769

Organism

Borrelia hermsii (strain DAH) [Complete proteome] [HAMAP]

Taxonomic identifier

314723 [NCBI]

Taxonomic lineage

Bacteria › Spirochaetes › Spirochaetales › Spirochaetaceae › Borrelia

Protein attributes

Sequence length	338 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t6A37) in tRNAs that read codons beginning with adenine By similarity. HAMAP MF_01445
Subcellular location	Cytoplasm Potential HAMAP MF_01445.
Sequence similarities	Belongs to the KAE1 / YgjD family.

Ontologies

Keywords
Biological process	tRNA processing
Cellular component	Cytoplasm
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	proteolysis Inferred from electronic annotation. Source: InterPro tRNA processing Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	metalloendopeptidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 338	338	Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp HAMAP MF_01445		PRO_1000145950

Sequences

	Sequence		Length	Mass (Da)
	B2S1B0 [UniParc]. Last modified July 1, 2008. Version 1. Checksum: 164CF179D149535F	FASTA	338	37,469
	10 20 30 40 50 60 MIVLGIESSC DDCCAAIVED GVKILSNIKL SQKEHKKYYG VVPEIASRLH TEFIMSVCQK 70 80 90 100 110 120 AITNAQIHAS EIDLIAVTSK PGLIGSLIVG INFAKGLSIA LKKPLICIDH ILGHLYAPLM 130 140 150 160 170 180 TIKIEYPFLS LILSGGHTIL AKQNDFDDIE ILGRTLDDAC GEAFDKVAKH YKMGFPGGPN 190 200 210 220 230 240 IEKLAKCGNQ YAFNFPITIF DKKENRYDFS YSGLKTACIH QLEKFKDKNE NITNNNIAAS 250 260 270 280 290 300 FQRVAFENLI IPIKRAIKDT NIKKLIISGG VASNLYLREK IKNLEVETYY PPIDLCTDNG 310 320 330 AMIAGIGYLM YLKYGASPIE TDANSRIENY KYTKGAKL

References

[1]

"The genome sequence of Borrelia hermsii and Borrelia turicatae: comparative analysis of two agents of endemic N. America relapsing fever." Porcella S.F., Raffel S.J., Schrumpf M.E., Montgomery B., Smith T., Schwan T.G. Submitted (DEC-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DAH.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000048 Genomic DNA. Translation: AAX17264.1.
RefSeq	YP_001884186.1. NC_010673.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B2S1B0.
Protein family/group databases
MEROPS	M22.001.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBBORT00000006630; EBBORP00000006054; EBBORG00000006630.
GeneID	6277083.
GenomeReviews	Gene locus BH0769 in contig CP000048_GR.
KEGG	bhr:BH0769.
PATRIC	20568922. VBIBorHer61105_0773.
Organism-specific databases
CMR	Search...
Phylogenomic databases
GeneTree	EBGT00050000006822.
HOGENOM	HBG304663.
OMA	PAVGVHH.
ProtClustDB	PRK09604.
Enzyme and pathway databases
BioCyc	BHER314723:BH0769-MONOMER.
Family and domain databases
HAMAP	MF_01445. gcp. [Tree]
InterPro	IPR022450. Pept_M22_O-sialoglycopept. IPR000905. Peptidase_M22. IPR017860. Peptidase_M22_CS. IPR017861. Peptidase_M22_subgr. [Graphical view]
KO	K01409.
Pfam	PF00814. Peptidase_M22. 1 hit. [Graphical view]
PRINTS	PR00789. OSIALOPTASE.
TIGRFAMs	TIGR03723. Bact_gcp. 1 hit. TIGR00329. Gcp_kae1. 1 hit.
PROSITE	PS01016. GLYCOPROTEASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

GCP_BORHD

Accession

Primary (citable) accession number: B2S1B0

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 14, 2009
Last sequence update:	July 1, 2008
Last modified:	January 25, 2012
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program