B2S039 (B2S039_BORHD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Oligopeptide transport system permease protein OppB EMBL AAX16845.1

Gene names

Ordered Locus Names:

BH0332

Organism

Borrelia hermsii (strain DAH) [Complete proteome] [HAMAP] EMBL AAX16845.1

Taxonomic identifier

314723 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Spirochaetes › Spirochaetia › Spirochaetales › Spirochaetaceae › Borrelia › Borrelia hermsii

Protein attributes

Sequence length	306 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Membrane; Multi-pass membrane protein By similarity RuleBase RU000478.
Sequence similarities	Belongs to the binding-protein-dependent transport system permease family. RuleBase RU000478

Ontologies

Keywords
Biological process	Transport RuleBase RU000478 SAAS SAAS000515
Cellular component	Cell membrane SAAS SAAS000515 Membrane
Domain	Transmembrane Transmembrane helix SAAS SAAS000515
Technical term	Complete proteome
Gene Ontology (GO)
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B2S039 [UniParc]. Last modified July 1, 2008. Version 1. Checksum: 2EE6BC0A72F08EFE	FASTA	306	34,172
	10 20 30 40 50 60 MLKFTIQKLL ETIPTLIAIT FLCFLIMRLA PGNPFDSEKP IDPQVKEKLM QKYHLDKPFY 70 80 90 100 110 120 MQAYYYITNI LKGDFGPSLV KKDLNVSQYI KLGFPKSFTI GIISLIISLT LGILLGSLAA 130 140 150 160 170 180 IKKNTRIDYI IRVAAIFGIS VPTFVTGPIL QYFLSVKLKL FYTSGWISER GGLANLVMPI 190 200 210 220 230 240 LTMSLPWIAI FTRIIRGSML EILKSDFVRT AKAKGLSFNV IIRKHVLIGS MLPLISYVGP 250 260 270 280 290 300 AFAGIISGSM VIEQIFRIAG MGIFTVEASL NRDYPLLMGS LLVYSTILLI SILASDIVYK KLDPRT

References

[1]

"The genome sequence of Borrelia hermsii and Borrelia turicatae: comparative analysis of two agents of endemic N. America relapsing fever." Porcella S.F., Raffel S.J., Schrumpf M.E., Montgomery B., Smith T., Schwan T.G. Submitted (DEC-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DAH.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000048 Genomic DNA. Translation: AAX16845.1.
RefSeq	YP_001883765.1. NC_010673.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	314723.BH0332.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAX16845; AAX16845; BH0332.
GeneID	6277022.
KEGG	bhr:BH0332.
PATRIC	20567986. VBIBorHer61105_0331.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4174.
HOGENOM	HOG000170249.
KO	K15581.
OMA	MPNIAIF.
ProtClustDB	CLSK507523.
Enzyme and pathway databases
BioCyc	BHER314723:GJES-324-MONOMER.
Family and domain databases
InterPro	IPR000515. BPD_transp. [Graphical view]
Pfam	PF00528. BPD_transp_1. 1 hit. [Graphical view]
PROSITE	PS50928. ABC_TM1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B2S039_BORHD

Accession

Primary (citable) accession number: B2S039

Entry history

Integrated into UniProtKB/TrEMBL:	July 1, 2008
Last sequence update:	July 1, 2008
Last modified:	May 1, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)