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B2RZ87

- MADL2_RAT

UniProt

B2RZ87 - MADL2_RAT

Protein

Myeloid-associated differentiation marker-like protein 2

Gene

Myadml2

Organism
Rattus norvegicus (Rat)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 29 (01 Oct 2014)
      Sequence version 1 (01 Jul 2008)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Myeloid-associated differentiation marker-like protein 2
    Gene namesi
    Name:Myadml2
    OrganismiRattus norvegicus (Rat)
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 10

    Organism-specific databases

    RGDi1311499. Myadml2.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 307307Myeloid-associated differentiation marker-like protein 2PRO_0000357328Add
    BLAST

    Expressioni

    Gene expression databases

    GenevestigatoriB2RZ87.

    Structurei

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei53 – 7321HelicalSequence AnalysisAdd
    BLAST
    Transmembranei90 – 11021HelicalSequence AnalysisAdd
    BLAST
    Transmembranei129 – 14921HelicalSequence AnalysisAdd
    BLAST
    Transmembranei163 – 18321HelicalSequence AnalysisAdd
    BLAST
    Transmembranei198 – 21821HelicalSequence AnalysisAdd
    BLAST
    Transmembranei232 – 25221HelicalSequence AnalysisAdd
    BLAST
    Transmembranei278 – 29821HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini17 – 154138MARVEL 1PROSITE-ProRule annotationAdd
    BLAST
    Domaini159 – 303145MARVEL 2PROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Belongs to the MAL family.Curated
    Contains 2 MARVEL domains.PROSITE-ProRule annotation

    Keywords - Domaini

    Repeat, Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiNOG291197.
    GeneTreeiENSGT00390000010832.
    HOVERGENiHBG052545.
    OMAiVATQWCV.
    OrthoDBiEOG73JKVX.
    PhylomeDBiB2RZ87.

    Family and domain databases

    InterProiIPR008253. Marvel.
    [Graphical view]
    PfamiPF01284. MARVEL. 2 hits.
    [Graphical view]
    PROSITEiPS51225. MARVEL. 2 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B2RZ87-1 [UniParc]FASTAAdd to Basket

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    MGSTMEPPGG AYLHLGAVTS PVGTARMLQL AFGCTTFSLV AHRGGFGGVQ    50
    GTFCMAAWGF CFAFSVLVVA CEFTRLHSCL RLSWGNFTAA FAMLATLLCA 100
    TAAVIYPLYF TRLECPPEPA GCMVRNFRLA ASVFAGLLFL AYAAEVALTR 150
    ARPGQVASYM ATVSGLLKIV QAFVACIIFG ALVHESRYGR YVATQWCVAV 200
    YSLCFMATVA VVVLSVMGHT GGLGCPFDRL VVVYTFLAVL LYLSAAVIWP 250
    VFCFDPKYGE PGRPSDCPRG SCPWDSQLVV AIFTYVNLLL YIVDLAYSQR 300
    IRFVPTL 307
    Length:307
    Mass (Da):33,165
    Last modified:July 1, 2008 - v1
    Checksum:i5243171B0B919E6D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH473948 Genomic DNA. Translation: EDM06879.1.
    BC167064 mRNA. Translation: AAI67064.1.
    RefSeqiNP_001121657.1. NM_001128185.1.
    UniGeneiRn.204828.

    Genome annotation databases

    EnsembliENSRNOT00000054948; ENSRNOP00000051831; ENSRNOG00000036681.
    GeneIDi303744.
    KEGGirno:303744.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH473948 Genomic DNA. Translation: EDM06879.1 .
    BC167064 mRNA. Translation: AAI67064.1 .
    RefSeqi NP_001121657.1. NM_001128185.1.
    UniGenei Rn.204828.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000054948 ; ENSRNOP00000051831 ; ENSRNOG00000036681 .
    GeneIDi 303744.
    KEGGi rno:303744.

    Organism-specific databases

    CTDi 255275.
    RGDi 1311499. Myadml2.

    Phylogenomic databases

    eggNOGi NOG291197.
    GeneTreei ENSGT00390000010832.
    HOVERGENi HBG052545.
    OMAi VATQWCV.
    OrthoDBi EOG73JKVX.
    PhylomeDBi B2RZ87.

    Miscellaneous databases

    NextBioi 651997.

    Gene expression databases

    Genevestigatori B2RZ87.

    Family and domain databases

    InterProi IPR008253. Marvel.
    [Graphical view ]
    Pfami PF01284. MARVEL. 2 hits.
    [Graphical view ]
    PROSITEi PS51225. MARVEL. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
      Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Heart.

    Entry informationi

    Entry nameiMADL2_RAT
    AccessioniPrimary (citable) accession number: B2RZ87
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 16, 2008
    Last sequence update: July 1, 2008
    Last modified: October 1, 2014
    This is version 29 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3