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Protein

39S ribosomal protein L36, mitochondrial

Gene

Mrpl36

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Component of the large subunit of the mitochondrial ribosome.Curated

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-RNO-5389840. Mitochondrial translation elongation.
R-RNO-5419276. Mitochondrial translation termination.

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L36, mitochondrial
Short name:
L36mt
Short name:
MRP-L36
Gene namesi
Name:Mrpl36
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi1306375. Mrpl36.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini? – 9739S ribosomal protein L36, mitochondrialPRO_0000383807
Transit peptidei1 – ?MitochondrionSequence analysis

Proteomic databases

PaxDbiB2RZ39.

Expressioni

Gene expression databases

GenevisibleiB2RZ39. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000067146.

Structurei

3D structure databases

ProteinModelPortaliB2RZ39.
SMRiB2RZ39. Positions 60-96.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L36P family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG4122. Eukaryota.
COG0257. LUCA.
GeneTreeiENSGT00390000010866.
HOGENOMiHOG000111586.
InParanoidiB2RZ39.
KOiK02919.
OMAiSAKPCAE.
OrthoDBiEOG79CZ1X.
PhylomeDBiB2RZ39.
TreeFamiTF300275.

Family and domain databases

HAMAPiMF_00251. Ribosomal_L36.
InterProiIPR000473. Ribosomal_L36.
[Graphical view]
PANTHERiPTHR18804. PTHR18804. 1 hit.
PfamiPF00444. Ribosomal_L36. 1 hit.
[Graphical view]
SUPFAMiSSF57840. SSF57840. 1 hit.
TIGRFAMsiTIGR01022. rpmJ_bact. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

B2RZ39-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAALFVRSVV ASVVDLSRLA VKPRAFSILL GTLPSAKPCA EVRSLLCGGP
60 70 80 90
VLSLQPSLGF KTKGVIKKRC RDCYMVKRRG RWFVLCKTNP KHKQRQM
Length:97
Mass (Da):10,801
Last modified:July 1, 2008 - v1
Checksum:iB1E9F1160FCE7B87
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH474002 Genomic DNA. Translation: EDL87648.1.
CH474002 Genomic DNA. Translation: EDL87649.1.
BC167015 mRNA. Translation: AAI67015.1.
RefSeqiNP_001102349.1. NM_001108879.1.
XP_003748731.1. XM_003748683.3.
XP_003753204.1. XM_003753156.3.
XP_006222939.1. XM_006222877.2.
XP_006222940.1. XM_006222878.2.
XP_006222941.1. XM_006222879.2.
XP_006227824.1. XM_006227762.2.
XP_006227825.1. XM_006227763.2.
XP_006227826.1. XM_006227764.2.
XP_006227827.1. XM_006227765.2.
XP_006227864.1. XM_006227802.2.
XP_006227865.1. XM_006227803.2.
XP_006227866.1. XM_006227804.2.
UniGeneiRn.7601.

Genome annotation databases

EnsembliENSRNOT00000029531; ENSRNOP00000032662; ENSRNOG00000023407.
ENSRNOT00000072992; ENSRNOP00000067146; ENSRNOG00000047971.
GeneIDi100910528.
364656.
KEGGirno:100910528.
rno:364656.
UCSCiRGD:1306375. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH474002 Genomic DNA. Translation: EDL87648.1.
CH474002 Genomic DNA. Translation: EDL87649.1.
BC167015 mRNA. Translation: AAI67015.1.
RefSeqiNP_001102349.1. NM_001108879.1.
XP_003748731.1. XM_003748683.3.
XP_003753204.1. XM_003753156.3.
XP_006222939.1. XM_006222877.2.
XP_006222940.1. XM_006222878.2.
XP_006222941.1. XM_006222879.2.
XP_006227824.1. XM_006227762.2.
XP_006227825.1. XM_006227763.2.
XP_006227826.1. XM_006227764.2.
XP_006227827.1. XM_006227765.2.
XP_006227864.1. XM_006227802.2.
XP_006227865.1. XM_006227803.2.
XP_006227866.1. XM_006227804.2.
UniGeneiRn.7601.

3D structure databases

ProteinModelPortaliB2RZ39.
SMRiB2RZ39. Positions 60-96.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000067146.

Proteomic databases

PaxDbiB2RZ39.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000029531; ENSRNOP00000032662; ENSRNOG00000023407.
ENSRNOT00000072992; ENSRNOP00000067146; ENSRNOG00000047971.
GeneIDi100910528.
364656.
KEGGirno:100910528.
rno:364656.
UCSCiRGD:1306375. rat.

Organism-specific databases

CTDi64979.
RGDi1306375. Mrpl36.

Phylogenomic databases

eggNOGiKOG4122. Eukaryota.
COG0257. LUCA.
GeneTreeiENSGT00390000010866.
HOGENOMiHOG000111586.
InParanoidiB2RZ39.
KOiK02919.
OMAiSAKPCAE.
OrthoDBiEOG79CZ1X.
PhylomeDBiB2RZ39.
TreeFamiTF300275.

Enzyme and pathway databases

ReactomeiR-RNO-5389840. Mitochondrial translation elongation.
R-RNO-5419276. Mitochondrial translation termination.

Miscellaneous databases

PROiB2RZ39.

Gene expression databases

GenevisibleiB2RZ39. RN.

Family and domain databases

HAMAPiMF_00251. Ribosomal_L36.
InterProiIPR000473. Ribosomal_L36.
[Graphical view]
PANTHERiPTHR18804. PTHR18804. 1 hit.
PfamiPF00444. Ribosomal_L36. 1 hit.
[Graphical view]
SUPFAMiSSF57840. SSF57840. 1 hit.
TIGRFAMsiTIGR01022. rpmJ_bact. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
    Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Spleen.

Entry informationi

Entry nameiRM36_RAT
AccessioniPrimary (citable) accession number: B2RZ39
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 22, 2009
Last sequence update: July 1, 2008
Last modified: June 8, 2016
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.