B2RYG5 (B2RYG5_RAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Taf15 protein EMBL AAI66769.1

Gene names

Name:

Taf15 EMBL AAI66769.1 RGD 1309595

Organism

Rattus norvegicus (Rat) EMBL AAI66769.1

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	572 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	nucleic acid binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B2RYG5 [UniParc]. Last modified July 1, 2008. Version 1. Checksum: 177A5101C3BAFE81	FASTA	572	60,068
	10 20 30 40 50 60 MSDSGSYSQS GGEQQSYSSY GNQGSQGYGQ TQQSYSGYGQ TTDSSYGQNY GGYSGYGQNQ 70 80 90 100 110 120 SGYSQSYGSY ENQKQSSYGQ QSYNNQGQQN TESSGGQGGR APSYGQSDYG QQDSYDQQSG 130 140 150 160 170 180 YDQHQGSYDE QSNYQQHDSY NQNQQSYHPQ RENYSHHTQD DRRDMSRYGE DNRGYGGSQG 190 200 210 220 230 240 GGRGRGGYDK DGRGPMTGSS GGDRGGFKNF GGHRDYGPRP DADSESDNSD NNTIFVQGLG 250 260 270 280 290 300 EGVSTDQVGE FFKQIGIIKT NKKTGKPMIN LYTDKDTGKP KGEATVSFDD PPSAKAAIDW 310 320 330 340 350 360 FDGKEFHGNI IKVSFATRRP EFMRGGGSGG GRRGRGGYRG RGGFQGRGGD PKNGDWVCPN 370 380 390 400 410 420 PSCGNMNFAR RNSCNQCNEP RPEDSRPSGG DFRGRGYGGE RGFRGRGGRG GDRGGYGADR 430 440 450 460 470 480 SGGGYGGDRS GGSYGADRSG GGYGGDRSGG GYGGDRGGGY GGDRGGYGGD RGGSYGGDRG 490 500 510 520 530 540 GYGGDRGGYG GDRGGYGGDR GGYGGDRSRG AYGGDRGGGS GGYGGDRSGG YGGDRGGGYG 550 560 570 GDRGGYGGDR GGYGGKMGGR NDYRNDQRNR PY

References

[1]

"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J. Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Prostate EMBL AAI66769.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC166769 mRNA. Translation: AAI66769.1.
IPI	IPI00364132.
UniGene	Rn.72554.
3D structure databases
SMR	B2RYG5. Positions 228-325.
ModBase	Search...
Protein-protein interaction databases
STRING	10116.ENSRNOP00000043425.
Proteomic databases
PRIDE	B2RYG5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Phylogenomic databases
eggNOG	NOG240581.
HOGENOM	HOG000038010.
HOVERGEN	HBG005755.
OrthoDB	EOG4MW872.
Gene expression databases
ArrayExpress	B2RYG5.
Genevestigator	B2RYG5.
Family and domain databases
Gene3D	3.30.70.330. 1 hit. 4.10.1060.10. 1 hit.
InterPro	IPR012677. Nucleotide-bd_a/b_plait. IPR000504. RRM_dom. IPR001876. Znf_RanBP2. [Graphical view]
Pfam	PF00076. RRM_1. 1 hit. PF00641. zf-RanBP. 1 hit. [Graphical view]
SMART	SM00360. RRM. 1 hit. SM00547. ZnF_RBZ. 1 hit. [Graphical view]
PROSITE	PS50102. RRM. 1 hit. PS01358. ZF_RANBP2_1. 1 hit. PS50199. ZF_RANBP2_2. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	35565001.

Entry information

Entry name

B2RYG5_RAT

Accession

Primary (citable) accession number: B2RYG5

Entry history

Integrated into UniProtKB/TrEMBL:	July 1, 2008
Last sequence update:	July 1, 2008
Last modified:	May 29, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)