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B2RXQ2

- B2RXQ2_MOUSE

UniProt

B2RXQ2 - B2RXQ2_MOUSE

Protein
Submitted name:

Ppfia1 protein

Gene

Ppfia1

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 1 (01 Jul 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. protein binding Source: MGI

    GO - Biological processi

    1. negative regulation of stress fiber assembly Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Ppfia1 proteinImported
    Submitted name:
    Protein Ppfia1Imported
    Gene namesi
    Name:Ppfia1Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 7

    Organism-specific databases

    MGIiMGI:1924750. Ppfia1.

    Expressioni

    Gene expression databases

    GenevestigatoriB2RXQ2.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG261376.
    GeneTreeiENSGT00660000095363.
    HOVERGENiHBG052330.
    OMAiSVPDFRF.

    Family and domain databases

    Gene3Di1.10.150.50. 2 hits.
    InterProiIPR029515. Liprin.
    IPR001660. SAM.
    IPR013761. SAM/pointed.
    IPR011510. SAM_2.
    IPR021129. SAM_type1.
    [Graphical view]
    PANTHERiPTHR12587. PTHR12587. 1 hit.
    PfamiPF00536. SAM_1. 2 hits.
    PF07647. SAM_2. 1 hit.
    [Graphical view]
    SMARTiSM00454. SAM. 3 hits.
    [Graphical view]
    SUPFAMiSSF47769. SSF47769. 3 hits.
    PROSITEiPS50105. SAM_DOMAIN. 3 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B2RXQ2-1 [UniParc]FASTAAdd to Basket

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    MMCEVMPTIS EAEGPPGGGG SHGSGSPSQP DADSHFEQLM VSMLEERDRL     50
    LDTLRETQET LALTQGKLHE VGHERDSLQR QLNTALPQEF AALTKELNVC 100
    REQLLEREEE IAELKAERNN TRLLLEHLEC LVSRHERSLR MTVVKRQAQS 150
    PAGVSSEVEV LKALKSLFEH HKALDEKVRE RLRVALERCS LLEEELGATH 200
    KELMILKEQN NQKKTLTDGL LDGNHEQESA PSTNGKRSSD GSLSHEDLAK 250
    VLELQEVIDR QAREQSQMKE RLASLSSHAA ELEEDLDTAR KDLIKSEEMN 300
    TKLQREVREA MAQKEDMEER ITTLEKRYLA AQREATSVHD LNDKLENEIA 350
    NKDSMHRQTE DKNRQLQERL ELAEQKLQQT LRKAETLPEV EAELAQRVAA 400
    LSKSGPLSSG SSAAKEAKLL ELTSKLRKAE ERHGNIEERL RQMEAQLEEK 450
    NQELQRARQR EKMNEEHNKR LSDTVDKLLS ESNERLQLHL KERMAALEDK 500
    NSLLREVENA KKQLEETQHD KDQLVVTIEA LKAELEQMRL RGPSLHHGRP 550
    HLGSVPDFRF SVADGHVDAY STSAVLRRPQ KGRLAALRDE PSKVQTLNEQ 600
    DWERAQQASV LANVAQAFES DVDVSDGEDD RDTLLSSVDL LSPSGQADAQ 650
    TLAMMLQEQL DAINKEIRLI QEEKENTEQR AEEIESRVGS GSLDNLGRFR 700
    SMSSIPPYPA SSLAGSSPPG SGRSTPRRVP HSPAREVDRL GVMTLPSDLR 750
    KHRRQLPASR EEVRDDKTTI KCETSPPSSP RPLRLDRMHK GAPHTVSHED 800
    IRDLRNSTGS QDGPVSNPSS SNSSQDSLHK APKKKGIKSS IGRLFGKKEK 850
    GRPGPLGKES PGQVGVSETE NSSQDALGLS KLGGQAEKNR KLQKKHELLE 900
    EARRQGLPFA QWDGPTVVVW LELWVGMPAW YVAACRANVK SGAIMSALSD 950
    TEIQREIGIS NPLHRLKLRL AIQEIMSLTS PSAPPTSRTT TGNVWLTHEE 1000
    METLTATPQT EDEEGSWAQT LAYGDMNHEW IGNEWLPSLG LPQYRSYFME 1050
    CLVDARMLDH LTKKDLRGQL KMVDSFHRNS FQCGIMCLRR LNYDRKELER 1100
    KREESQNETR DVLVWSNDRV IRWILSIGLK EYANNLIESG VHGALLALDE 1150
    TFDFSALALL LQIPTQNTQA RAVLEREFNN LLITGTDRRF DEDDDKSFRR 1200
    APSWRKKFRP KDIRGLASGS AETLPANFRV TSSMSSPSMQ PKKVQMDGSV 1250
    SGAQRLDSAT VRTYSC 1266
    Length:1,266
    Mass (Da):142,676
    Last modified:July 1, 2008 - v1
    Checksum:i545C3EFBF1067EBC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC140268 Genomic DNA. No translation available.
    AC153792 Genomic DNA. No translation available.
    BC157936 mRNA. Translation: AAI57937.1.
    BC172096 mRNA. Translation: AAI72096.1.
    RefSeqiNP_001182015.1. NM_001195086.1.
    UniGeneiMm.490347.

    Genome annotation databases

    EnsembliENSMUST00000182226; ENSMUSP00000138312; ENSMUSG00000037519.
    GeneIDi233977.
    KEGGimmu:233977.
    UCSCiuc012fxz.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC140268 Genomic DNA. No translation available.
    AC153792 Genomic DNA. No translation available.
    BC157936 mRNA. Translation: AAI57937.1 .
    BC172096 mRNA. Translation: AAI72096.1 .
    RefSeqi NP_001182015.1. NM_001195086.1.
    UniGenei Mm.490347.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000182226 ; ENSMUSP00000138312 ; ENSMUSG00000037519 .
    GeneIDi 233977.
    KEGGi mmu:233977.
    UCSCi uc012fxz.1. mouse.

    Organism-specific databases

    CTDi 8500.
    MGIi MGI:1924750. Ppfia1.

    Phylogenomic databases

    eggNOGi NOG261376.
    GeneTreei ENSGT00660000095363.
    HOVERGENi HBG052330.
    OMAi SVPDFRF.

    Miscellaneous databases

    NextBioi 381971.
    SOURCEi Search...

    Gene expression databases

    Genevestigatori B2RXQ2.

    Family and domain databases

    Gene3Di 1.10.150.50. 2 hits.
    InterProi IPR029515. Liprin.
    IPR001660. SAM.
    IPR013761. SAM/pointed.
    IPR011510. SAM_2.
    IPR021129. SAM_type1.
    [Graphical view ]
    PANTHERi PTHR12587. PTHR12587. 1 hit.
    Pfami PF00536. SAM_1. 2 hits.
    PF07647. SAM_2. 1 hit.
    [Graphical view ]
    SMARTi SM00454. SAM. 3 hits.
    [Graphical view ]
    SUPFAMi SSF47769. SSF47769. 3 hits.
    PROSITEi PS50105. SAM_DOMAIN. 3 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: BrainImported.
    2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    3. "The phagosomal proteome in interferon-gamma-activated macrophages."
      Trost M., English L., Lemieux S., Courcelles M., Desjardins M., Thibault P.
      Immunity 30:143-154(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    5. Ensembl
      Submitted (JUL-2013) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiB2RXQ2_MOUSE
    AccessioniPrimary (citable) accession number: B2RXQ2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 1, 2008
    Last sequence update: July 1, 2008
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3