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B2RXQ2

- B2RXQ2_MOUSE

UniProt

B2RXQ2 - B2RXQ2_MOUSE

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Protein
Submitted name: Ppfia1 protein
Gene
Ppfia1
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. protein binding Source: MGI

GO - Biological processi

  1. negative regulation of stress fiber assembly Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Ppfia1 proteinImported
Submitted name:
Protein Ppfia1Imported
Gene namesi
Name:Ppfia1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 7

Organism-specific databases

MGIiMGI:1924750. Ppfia1.

Expressioni

Gene expression databases

GenevestigatoriB2RXQ2.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG261376.
GeneTreeiENSGT00660000095363.
HOVERGENiHBG052330.
OMAiSVPDFRF.

Family and domain databases

Gene3Di1.10.150.50. 2 hits.
InterProiIPR029515. Liprin.
IPR001660. SAM.
IPR013761. SAM/pointed.
IPR011510. SAM_2.
IPR021129. SAM_type1.
[Graphical view]
PANTHERiPTHR12587. PTHR12587. 1 hit.
PfamiPF00536. SAM_1. 2 hits.
PF07647. SAM_2. 1 hit.
[Graphical view]
SMARTiSM00454. SAM. 3 hits.
[Graphical view]
SUPFAMiSSF47769. SSF47769. 3 hits.
PROSITEiPS50105. SAM_DOMAIN. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B2RXQ2-1 [UniParc]FASTAAdd to Basket

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MMCEVMPTIS EAEGPPGGGG SHGSGSPSQP DADSHFEQLM VSMLEERDRL     50
LDTLRETQET LALTQGKLHE VGHERDSLQR QLNTALPQEF AALTKELNVC 100
REQLLEREEE IAELKAERNN TRLLLEHLEC LVSRHERSLR MTVVKRQAQS 150
PAGVSSEVEV LKALKSLFEH HKALDEKVRE RLRVALERCS LLEEELGATH 200
KELMILKEQN NQKKTLTDGL LDGNHEQESA PSTNGKRSSD GSLSHEDLAK 250
VLELQEVIDR QAREQSQMKE RLASLSSHAA ELEEDLDTAR KDLIKSEEMN 300
TKLQREVREA MAQKEDMEER ITTLEKRYLA AQREATSVHD LNDKLENEIA 350
NKDSMHRQTE DKNRQLQERL ELAEQKLQQT LRKAETLPEV EAELAQRVAA 400
LSKSGPLSSG SSAAKEAKLL ELTSKLRKAE ERHGNIEERL RQMEAQLEEK 450
NQELQRARQR EKMNEEHNKR LSDTVDKLLS ESNERLQLHL KERMAALEDK 500
NSLLREVENA KKQLEETQHD KDQLVVTIEA LKAELEQMRL RGPSLHHGRP 550
HLGSVPDFRF SVADGHVDAY STSAVLRRPQ KGRLAALRDE PSKVQTLNEQ 600
DWERAQQASV LANVAQAFES DVDVSDGEDD RDTLLSSVDL LSPSGQADAQ 650
TLAMMLQEQL DAINKEIRLI QEEKENTEQR AEEIESRVGS GSLDNLGRFR 700
SMSSIPPYPA SSLAGSSPPG SGRSTPRRVP HSPAREVDRL GVMTLPSDLR 750
KHRRQLPASR EEVRDDKTTI KCETSPPSSP RPLRLDRMHK GAPHTVSHED 800
IRDLRNSTGS QDGPVSNPSS SNSSQDSLHK APKKKGIKSS IGRLFGKKEK 850
GRPGPLGKES PGQVGVSETE NSSQDALGLS KLGGQAEKNR KLQKKHELLE 900
EARRQGLPFA QWDGPTVVVW LELWVGMPAW YVAACRANVK SGAIMSALSD 950
TEIQREIGIS NPLHRLKLRL AIQEIMSLTS PSAPPTSRTT TGNVWLTHEE 1000
METLTATPQT EDEEGSWAQT LAYGDMNHEW IGNEWLPSLG LPQYRSYFME 1050
CLVDARMLDH LTKKDLRGQL KMVDSFHRNS FQCGIMCLRR LNYDRKELER 1100
KREESQNETR DVLVWSNDRV IRWILSIGLK EYANNLIESG VHGALLALDE 1150
TFDFSALALL LQIPTQNTQA RAVLEREFNN LLITGTDRRF DEDDDKSFRR 1200
APSWRKKFRP KDIRGLASGS AETLPANFRV TSSMSSPSMQ PKKVQMDGSV 1250
SGAQRLDSAT VRTYSC 1266
Length:1,266
Mass (Da):142,676
Last modified:July 1, 2008 - v1
Checksum:i545C3EFBF1067EBC
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC140268 Genomic DNA. No translation available.
AC153792 Genomic DNA. No translation available.
BC157936 mRNA. Translation: AAI57937.1.
BC172096 mRNA. Translation: AAI72096.1.
RefSeqiNP_001182015.1. NM_001195086.1.
UniGeneiMm.490347.

Genome annotation databases

EnsembliENSMUST00000182226; ENSMUSP00000138312; ENSMUSG00000037519.
GeneIDi233977.
KEGGimmu:233977.
UCSCiuc012fxz.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC140268 Genomic DNA. No translation available.
AC153792 Genomic DNA. No translation available.
BC157936 mRNA. Translation: AAI57937.1 .
BC172096 mRNA. Translation: AAI72096.1 .
RefSeqi NP_001182015.1. NM_001195086.1.
UniGenei Mm.490347.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000182226 ; ENSMUSP00000138312 ; ENSMUSG00000037519 .
GeneIDi 233977.
KEGGi mmu:233977.
UCSCi uc012fxz.1. mouse.

Organism-specific databases

CTDi 8500.
MGIi MGI:1924750. Ppfia1.

Phylogenomic databases

eggNOGi NOG261376.
GeneTreei ENSGT00660000095363.
HOVERGENi HBG052330.
OMAi SVPDFRF.

Miscellaneous databases

NextBioi 381971.
SOURCEi Search...

Gene expression databases

Genevestigatori B2RXQ2.

Family and domain databases

Gene3Di 1.10.150.50. 2 hits.
InterProi IPR029515. Liprin.
IPR001660. SAM.
IPR013761. SAM/pointed.
IPR011510. SAM_2.
IPR021129. SAM_type1.
[Graphical view ]
PANTHERi PTHR12587. PTHR12587. 1 hit.
Pfami PF00536. SAM_1. 2 hits.
PF07647. SAM_2. 1 hit.
[Graphical view ]
SMARTi SM00454. SAM. 3 hits.
[Graphical view ]
SUPFAMi SSF47769. SSF47769. 3 hits.
PROSITEi PS50105. SAM_DOMAIN. 3 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: BrainImported.
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. "The phagosomal proteome in interferon-gamma-activated macrophages."
    Trost M., English L., Lemieux S., Courcelles M., Desjardins M., Thibault P.
    Immunity 30:143-154(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  5. Ensembl
    Submitted (JUL-2013) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiB2RXQ2_MOUSE
AccessioniPrimary (citable) accession number: B2RXQ2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: September 3, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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