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B2RQX9 (B2RQX9_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length791 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B2RQX9 [UniParc].

Last modified July 1, 2008. Version 1.
Checksum: 3400501C93EC4421

FASTA79187,029
        10         20         30         40         50         60 
MNKQPANILE AAVPGHRDSP RAPRTSPEQD LPAEAPTATV QPPRVPRSAS TGAQTFQSAD 

        70         80         90        100        110        120 
ARACEAQQSG VGFCNLSSPR AQATSAALRD LSEGHSAQAN PPSGPAGAGN ALHCKIPALR 

       130        140        150        160        170        180 
GPEEDANVSV GKGTLEHNNT PAVGWVNMSQ STVVLGTDGI ASVLPGSVAT TTIPEDEQGD 

       190        200        210        220        230        240 
ENKARGNWSS KLDFILSMVG YAVGLGNVWR FPYLAFQNGG GAFLIPYLMM LALAGLPIFF 

       250        260        270        280        290        300 
LEVSLGQFAS QGPVSVWKAI PALQGCGIAM LIISVLIAIY YNVIICYTLF YLFASFVSVL 

       310        320        330        340        350        360 
PWGSCNNPWN TPECKDKTKL LLDSCVIGDH PKIQIKNSTF CMTAYPNLTM VNFTSQTNKT 

       370        380        390        400        410        420 
FVSGSEEYFK YFVLKISAGI EYPGEIRWPL AFCLFLAWVI VYASLAKGIK SSGKVVYFTA 

       430        440        450        460        470        480 
TFPYVVLVIL LIRGVTLPGA GAGIWYFITP KWEKLTDATV WKDAATQIFF SLSAAWGGLI 

       490        500        510        520        530        540 
TLSSYNKFHN NCYRDTLIVT CTNSATSIFA GFVIFSVIGF MANERKVNIE NVADQGPGIA 

       550        560        570        580        590        600 
FVVYPEALTR LPLSPFWAII FFLMLLTLGL DTMFATIETI VTSISDEFPK YLRTHKPVFT 

       610        620        630        640        650        660 
LGCCICFFIM GFPMITQGGI YMFQLVDTYA ASYALVIIAI FELVGISYVY GLQRFCEDIE 

       670        680        690        700        710        720 
MMIGFKPNIF WKVCWAFVTP TILTFILCFS FYQWEPMTYG SYRYPNWSMV LGWLMLACSV 

       730        740        750        760        770        780 
IWIPIMFVIK MYLAPGRFIE RLKLVCSPQP DWGPFLAQHR GERYKNMIDP LGTSSLGLKL 

       790 
PVKDLELGTQ C 

« Hide

References

« Hide 'large scale' references
[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Brain EMBL AAI38126.1.
[2]"Lineage-specific biology revealed by a finished genome assembly of the mouse."
Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. expand/collapse author list , Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K., Eichler E.E., Ponting C.P.
PLoS Biol. 7:E1000112-E1000112(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C57BL/6J Ensembl ENSMUSP00000058699 Ensembl ENSMUSP00000103230.
[3]Ensembl
Submitted (FEB-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: C57BL/6J Ensembl ENSMUSP00000058699 Ensembl ENSMUSP00000103230.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC116694 Genomic DNA. No translation available.
AC135354 Genomic DNA. No translation available.
BC138125 mRNA. Translation: AAI38126.1.
BC138126 mRNA. Translation: AAI38127.1.
RefSeqNP_001139485.1. NM_001146013.1.
NP_683733.2. NM_148931.3.
XP_006540610.1. XM_006540547.1.
UniGeneMm.207053.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000056442; ENSMUSP00000058699; ENSMUSG00000039728.
ENSMUST00000107605; ENSMUSP00000103230; ENSMUSG00000039728.
GeneID104245.
KEGGmmu:104245.
UCSCuc009hbv.2. mouse.

Organism-specific databases

CTD9152.
MGIMGI:105090. Slc6a5.

Phylogenomic databases

GeneTreeENSGT00740000115427.
HOVERGENHBG071421.
InParanoidB2RQX9.
KOK05038.
OMAGNALHCK.
OrthoDBEOG793B71.
TreeFamTF343812.

Gene expression databases

GenevestigatorB2RQX9.

Family and domain databases

InterProIPR000175. Na/ntran_symport.
[Graphical view]
PANTHERPTHR11616. PTHR11616. 1 hit.
PfamPF00209. SNF. 1 hit.
[Graphical view]
PRINTSPR00176. NANEUSMPORT.
PROSITEPS00610. NA_NEUROTRAN_SYMP_1. 1 hit.
PS00754. NA_NEUROTRAN_SYMP_2. 1 hit.
PS50267. NA_NEUROTRAN_SYMP_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio356802.
SOURCESearch...

Entry information

Entry nameB2RQX9_MOUSE
AccessionPrimary (citable) accession number: B2RQX9
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: April 16, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)