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B2RQG2

- B2RQG2_MOUSE

UniProt

B2RQG2 - B2RQG2_MOUSE

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Protein
Submitted name:

PHD finger protein 3

Gene

Phf3

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. zinc ion binding Source: InterPro

GO - Biological processi

  1. transcription, DNA-templated Source: InterPro
Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
PHD finger protein 3Imported
Submitted name:
Protein Phf3Imported
Gene namesi
Name:Phf3Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 1

Organism-specific databases

MGIiMGI:2446126. Phf3.

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: InterPro
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriB2RQG2.

Family & Domainsi

Keywords - Domaini

Zinc-fingerSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00530000063844.
HOGENOMiHOG000060123.
HOVERGENiHBG039623.
OMAiQMPCSTV.
OrthoDBiEOG7NW685.
TreeFamiTF350578.

Family and domain databases

Gene3Di1.10.472.30. 1 hit.
3.30.40.10. 1 hit.
InterProiIPR012921. SPOC_C.
IPR003618. TFIIS_cen_dom.
IPR017890. TFS2M.
IPR019786. Zinc_finger_PHD-type_CS.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR019787. Znf_PHD-finger.
IPR013083. Znf_RING/FYVE/PHD.
[Graphical view]
PfamiPF00628. PHD. 1 hit.
PF07744. SPOC. 1 hit.
PF07500. TFIIS_M. 1 hit.
[Graphical view]
SMARTiSM00249. PHD. 1 hit.
SM00510. TFS2M. 1 hit.
[Graphical view]
SUPFAMiSSF46942. SSF46942. 1 hit.
SSF57903. SSF57903. 1 hit.
PROSITEiPS51321. TFIIS_CENTRAL. 1 hit.
PS01359. ZF_PHD_1. 1 hit.
PS50016. ZF_PHD_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B2RQG2 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDIVDTFNHL IPTEHLDDAL FLGSNLENEV CEDFSTSQNV LEDSLKNMLS
60 70 80 90 100
DKDPMLGSAS NQFCLPVLDS NDPNFQMPCS TVVGLDDIMD EGVVKESGND
110 120 130 140 150
TIDEEELILP NRSLRDRVED NSVRSPRKSP RLMAQEQVRS LRQSTIAKRS
160 170 180 190 200
NAATLSTKKP SGKTLSTSKV GVKPAERCQG KEEVYASLKS EHPKESRRSG
210 220 230 240 250
RHAEQMDVAP EVSASSVDSS VSSCAGMKEE AEFDPKHACN NQGEVNVPSP
260 270 280 290 300
ELDCPLLSET SASVEEKNIE ALMECKAKTN SSPLFKFPVR EDEQSDLVSG
310 320 330 340 350
ELNDTIEGKD AGGKPDQESE EVKFPCEGDQ TAEEPESSDV SSDSACANKN
360 370 380 390 400
KAEKNEGAEC HLELKNTVDI VDKPENSPQR NELETLGYGE DTESNDARLQ
410 420 430 440 450
STEFNKSDLE EVDACAFEPE ASTLENTICD VLDQNSKQLN ITQSIKMETA
460 470 480 490 500
NLQDDRSGLE PKNIKPKHIK SVTHSKQSMT TETPRKTVAA KHEVGHSKTK
510 520 530 540 550
SNVKAVKRNS GEPEPQPDSQ RPVKVRKKQG DKVWKSQSCN SGVKSVKSQA
560 570 580 590 600
HSVLKRMPQD QNTMQISKPL THPHSDKLHG HSGFSKEPPH PVQTGHLVHS
610 620 630 640 650
SQKQSQKPQQ QAAVGKGSSH VKDEHDHPVS EHLKEDDKLK PRKPDRNLQP
660 670 680 690 700
RQRRSSRSFS LDEPPLFIPD NIATVKKEGS DQTTSIESKY MWTPSKQCGF
710 720 730 740 750
CKKPHGNRFM VGCGRCDDWF HGDCVGLSLS QAQQMGEEDK EYVCVRCCAE
760 770 780 790 800
EDKKTDILDT EIFEAQAPIE AHSEDKRMEC GKLTSSKHAV TDDKHRHSDD
810 820 830 840 850
PGKHKVKILK RESGEGKTSS DSRDNEIKKW QLAPLRKLSQ PHLPRRSSEE
860 870 880 890 900
KSEKIAKEST ALASTGERVA RSGTHEKQET KKKKMEKGGP NVHPPAATSK
910 920 930 940 950
PSADQIRQSV RHSLKDILMK RLTDSNLKIP EEKAAKVATK IEKELFSFFR
960 970 980 990 1000
DTDAKYKNKY RSLMFNLKDP KNNILFKKVL KGEVTPDHLI RMSPEELASK
1010 1020 1030 1040 1050
ELAAWRRREN RHTIEMIEKE QREVERRPIT KITHKGEIEI ESDAPMKEQE
1060 1070 1080 1090 1100
AAIEIQEPSA NKSMEKPDVS EKQKEEVDST SKDTTSQHRQ HLFDLNCKIC
1110 1120 1130 1140 1150
IGRMAPPIDD LSPKTVKVVV GGARKHSDNE AESLADALSS TTNILTSDLF
1160 1170 1180 1190 1200
EEEKQESPKS TFSPTPRPEM PGTVEVESTF LARLNFIWKG FINMPSVAKF
1210 1220 1230 1240 1250
VTKAYPVSGS PEYLTEDLPD SIQVGGRISP QTVWDYVEKI KASGTKEICV
1260 1270 1280 1290 1300
VRFTPVTEED QISYTLLFAY FSSRKRYGVA ANNMKQVKDM YLIPLGAADK
1310 1320 1330 1340 1350
IPHPLVPFDG PGLELHRPNL LLGLIIRQKL KRPHSASAGP SHTGETPESA
1360 1370 1380 1390 1400
PIVLPPDKKG KMESCTEEAA EEESDFFNSF TTVLHKQRNK PSQPLQEDLP
1410 1420 1430 1440 1450
TAAEPLMEVT KQEPPKPLRF LPGVLIGWDN QPSTLELANK PLPVDDILQS
1460 1470 1480 1490 1500
LLGTTGQVYE QAQPLVEQST LKEIPFINDQ ANPKVEKIDK VEVTEGDAKE
1510 1520 1530 1540 1550
IKVKAENISV STSKNSGEET SSVGSSSISP GPLASLSLRG KPPDVSTEAF
1560 1570 1580 1590 1600
LTNLSIPSKQ EESVENKERT LKRLLLQDQE NSLQDNRTSS DSPCWPGTGK
1610 1620 1630 1640 1650
GGMDGDGSGS GSGSGSGSEG PVANTRAPQF INLKRDPRQA AGRSQQTASE
1660 1670 1680 1690 1700
SKDAESCRNG DKHAASAPPH NKEPLAEAVG GEGKLPSQEK SSCVEQNDDS
1710 1720 1730 1740 1750
EAAPNSSSVE NLNSSQAEQA NPSQEDVLTQ NIETVHPFRR GSAPTSSRFE
1760 1770 1780 1790 1800
GGNTCQSEFP SKSVSFTCRS SSPRASTNFS PMRPQQPNLQ HLKSSPPGFP
1810 1820 1830 1840 1850
FPGPQNFPPQ NMFGFPPHLS PPLLPPPGFG FPQNPPMVPW PPVHVPGQPQ
1860 1870 1880 1890 1900
RMMGPLSQAS RYMGPQNFYQ VKDIRRPERR HSDPWGRQDQ QQPDRPFNRG
1910 1920 1930 1940 1950
KGDRQRFYSD SHHLKRERHD KDWEQESERH RHRDRSQERD RDRKSKEEAA
1960 1970 1980 1990 2000
AHKDKERPRL SHGDRAPDGK ASRDGKSADK KPDRPKGEDH EKEKERDKSK
2010 2020
HKEGEKDRER YHKDRDHTDR VKSKR
Length:2,025
Mass (Da):225,542
Last modified:July 1, 2008 - v1
Checksum:i5B391558E582C215
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC124469 Genomic DNA. No translation available.
AC153137 Genomic DNA. No translation available.
BC137913 mRNA. Translation: AAI37914.1.
RefSeqiNP_001074549.1. NM_001081080.1.
XP_006495899.1. XM_006495836.1.
XP_006495900.1. XM_006495837.1.
UniGeneiMm.194486.
Mm.486727.

Genome annotation databases

EnsembliENSMUST00000088310; ENSMUSP00000085650; ENSMUSG00000048874.
ENSMUST00000186733; ENSMUSP00000139610; ENSMUSG00000048874.
GeneIDi213109.
KEGGimmu:213109.
UCSCiuc007ane.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC124469 Genomic DNA. No translation available.
AC153137 Genomic DNA. No translation available.
BC137913 mRNA. Translation: AAI37914.1 .
RefSeqi NP_001074549.1. NM_001081080.1.
XP_006495899.1. XM_006495836.1.
XP_006495900.1. XM_006495837.1.
UniGenei Mm.194486.
Mm.486727.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000088310 ; ENSMUSP00000085650 ; ENSMUSG00000048874 .
ENSMUST00000186733 ; ENSMUSP00000139610 ; ENSMUSG00000048874 .
GeneIDi 213109.
KEGGi mmu:213109.
UCSCi uc007ane.1. mouse.

Organism-specific databases

CTDi 23469.
MGIi MGI:2446126. Phf3.

Phylogenomic databases

GeneTreei ENSGT00530000063844.
HOGENOMi HOG000060123.
HOVERGENi HBG039623.
OMAi QMPCSTV.
OrthoDBi EOG7NW685.
TreeFami TF350578.

Miscellaneous databases

ChiTaRSi PHF3. mouse.
NextBioi 373859.
PROi B2RQG2.
SOURCEi Search...

Gene expression databases

Genevestigatori B2RQG2.

Family and domain databases

Gene3Di 1.10.472.30. 1 hit.
3.30.40.10. 1 hit.
InterProi IPR012921. SPOC_C.
IPR003618. TFIIS_cen_dom.
IPR017890. TFS2M.
IPR019786. Zinc_finger_PHD-type_CS.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR019787. Znf_PHD-finger.
IPR013083. Znf_RING/FYVE/PHD.
[Graphical view ]
Pfami PF00628. PHD. 1 hit.
PF07744. SPOC. 1 hit.
PF07500. TFIIS_M. 1 hit.
[Graphical view ]
SMARTi SM00249. PHD. 1 hit.
SM00510. TFS2M. 1 hit.
[Graphical view ]
SUPFAMi SSF46942. SSF46942. 1 hit.
SSF57903. SSF57903. 1 hit.
PROSITEi PS51321. TFIIS_CENTRAL. 1 hit.
PS01359. ZF_PHD_1. 1 hit.
PS50016. ZF_PHD_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: BrainImported.
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  4. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.
  5. Ensembl
    Submitted (SEP-2014) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiB2RQG2_MOUSE
AccessioniPrimary (citable) accession number: B2RQG2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: October 29, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3