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B2RQG2

- B2RQG2_MOUSE

UniProt

B2RQG2 - B2RQG2_MOUSE

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Protein
Submitted name: PHD finger protein 3
Gene
Phf3
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. zinc ion binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. transcription, DNA-templated Source: InterPro
Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
PHD finger protein 3Imported
Submitted name:
Protein Phf3Imported
Gene namesi
Name:Phf3Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 1

Organism-specific databases

MGIiMGI:2446126. Phf3.

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: InterPro
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriB2RQG2.

Family & Domainsi

Keywords - Domaini

Zinc-fingerSAAS annotations

Phylogenomic databases

GeneTreeiENSGT00530000063844.
HOGENOMiHOG000060123.
HOVERGENiHBG039623.
InParanoidiB2RQG2.
OMAiQMPCSTV.
OrthoDBiEOG7NW685.
TreeFamiTF350578.

Family and domain databases

Gene3Di1.10.472.30. 1 hit.
3.30.40.10. 1 hit.
InterProiIPR012921. SPOC_C.
IPR003618. TFIIS_cen_dom.
IPR017890. TFS2M.
IPR019786. Zinc_finger_PHD-type_CS.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR019787. Znf_PHD-finger.
IPR013083. Znf_RING/FYVE/PHD.
[Graphical view]
PfamiPF00628. PHD. 1 hit.
PF07744. SPOC. 1 hit.
PF07500. TFIIS_M. 1 hit.
[Graphical view]
SMARTiSM00249. PHD. 1 hit.
SM00510. TFS2M. 1 hit.
[Graphical view]
SUPFAMiSSF46942. SSF46942. 1 hit.
SSF57903. SSF57903. 1 hit.
PROSITEiPS51321. TFIIS_CENTRAL. 1 hit.
PS01359. ZF_PHD_1. 1 hit.
PS50016. ZF_PHD_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B2RQG2-1 [UniParc]FASTAAdd to Basket

« Hide

MDIVDTFNHL IPTEHLDDAL FLGSNLENEV CEDFSTSQNV LEDSLKNMLS     50
DKDPMLGSAS NQFCLPVLDS NDPNFQMPCS TVVGLDDIMD EGVVKESGND 100
TIDEEELILP NRSLRDRVED NSVRSPRKSP RLMAQEQVRS LRQSTIAKRS 150
NAATLSTKKP SGKTLSTSKV GVKPAERCQG KEEVYASLKS EHPKESRRSG 200
RHAEQMDVAP EVSASSVDSS VSSCAGMKEE AEFDPKHACN NQGEVNVPSP 250
ELDCPLLSET SASVEEKNIE ALMECKAKTN SSPLFKFPVR EDEQSDLVSG 300
ELNDTIEGKD AGGKPDQESE EVKFPCEGDQ TAEEPESSDV SSDSACANKN 350
KAEKNEGAEC HLELKNTVDI VDKPENSPQR NELETLGYGE DTESNDARLQ 400
STEFNKSDLE EVDACAFEPE ASTLENTICD VLDQNSKQLN ITQSIKMETA 450
NLQDDRSGLE PKNIKPKHIK SVTHSKQSMT TETPRKTVAA KHEVGHSKTK 500
SNVKAVKRNS GEPEPQPDSQ RPVKVRKKQG DKVWKSQSCN SGVKSVKSQA 550
HSVLKRMPQD QNTMQISKPL THPHSDKLHG HSGFSKEPPH PVQTGHLVHS 600
SQKQSQKPQQ QAAVGKGSSH VKDEHDHPVS EHLKEDDKLK PRKPDRNLQP 650
RQRRSSRSFS LDEPPLFIPD NIATVKKEGS DQTTSIESKY MWTPSKQCGF 700
CKKPHGNRFM VGCGRCDDWF HGDCVGLSLS QAQQMGEEDK EYVCVRCCAE 750
EDKKTDILDT EIFEAQAPIE AHSEDKRMEC GKLTSSKHAV TDDKHRHSDD 800
PGKHKVKILK RESGEGKTSS DSRDNEIKKW QLAPLRKLSQ PHLPRRSSEE 850
KSEKIAKEST ALASTGERVA RSGTHEKQET KKKKMEKGGP NVHPPAATSK 900
PSADQIRQSV RHSLKDILMK RLTDSNLKIP EEKAAKVATK IEKELFSFFR 950
DTDAKYKNKY RSLMFNLKDP KNNILFKKVL KGEVTPDHLI RMSPEELASK 1000
ELAAWRRREN RHTIEMIEKE QREVERRPIT KITHKGEIEI ESDAPMKEQE 1050
AAIEIQEPSA NKSMEKPDVS EKQKEEVDST SKDTTSQHRQ HLFDLNCKIC 1100
IGRMAPPIDD LSPKTVKVVV GGARKHSDNE AESLADALSS TTNILTSDLF 1150
EEEKQESPKS TFSPTPRPEM PGTVEVESTF LARLNFIWKG FINMPSVAKF 1200
VTKAYPVSGS PEYLTEDLPD SIQVGGRISP QTVWDYVEKI KASGTKEICV 1250
VRFTPVTEED QISYTLLFAY FSSRKRYGVA ANNMKQVKDM YLIPLGAADK 1300
IPHPLVPFDG PGLELHRPNL LLGLIIRQKL KRPHSASAGP SHTGETPESA 1350
PIVLPPDKKG KMESCTEEAA EEESDFFNSF TTVLHKQRNK PSQPLQEDLP 1400
TAAEPLMEVT KQEPPKPLRF LPGVLIGWDN QPSTLELANK PLPVDDILQS 1450
LLGTTGQVYE QAQPLVEQST LKEIPFINDQ ANPKVEKIDK VEVTEGDAKE 1500
IKVKAENISV STSKNSGEET SSVGSSSISP GPLASLSLRG KPPDVSTEAF 1550
LTNLSIPSKQ EESVENKERT LKRLLLQDQE NSLQDNRTSS DSPCWPGTGK 1600
GGMDGDGSGS GSGSGSGSEG PVANTRAPQF INLKRDPRQA AGRSQQTASE 1650
SKDAESCRNG DKHAASAPPH NKEPLAEAVG GEGKLPSQEK SSCVEQNDDS 1700
EAAPNSSSVE NLNSSQAEQA NPSQEDVLTQ NIETVHPFRR GSAPTSSRFE 1750
GGNTCQSEFP SKSVSFTCRS SSPRASTNFS PMRPQQPNLQ HLKSSPPGFP 1800
FPGPQNFPPQ NMFGFPPHLS PPLLPPPGFG FPQNPPMVPW PPVHVPGQPQ 1850
RMMGPLSQAS RYMGPQNFYQ VKDIRRPERR HSDPWGRQDQ QQPDRPFNRG 1900
KGDRQRFYSD SHHLKRERHD KDWEQESERH RHRDRSQERD RDRKSKEEAA 1950
AHKDKERPRL SHGDRAPDGK ASRDGKSADK KPDRPKGEDH EKEKERDKSK 2000
HKEGEKDRER YHKDRDHTDR VKSKR 2025
Length:2,025
Mass (Da):225,542
Last modified:July 1, 2008 - v1
Checksum:i5B391558E582C215
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC124469 Genomic DNA. No translation available.
AC153137 Genomic DNA. No translation available.
BC137913 mRNA. Translation: AAI37914.1.
RefSeqiNP_001074549.1. NM_001081080.1.
XP_006495899.1. XM_006495836.1.
XP_006495900.1. XM_006495837.1.
UniGeneiMm.194486.
Mm.486727.

Genome annotation databases

EnsembliENSMUST00000088310; ENSMUSP00000085650; ENSMUSG00000048874.
GeneIDi213109.
KEGGimmu:213109.
UCSCiuc007ane.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC124469 Genomic DNA. No translation available.
AC153137 Genomic DNA. No translation available.
BC137913 mRNA. Translation: AAI37914.1 .
RefSeqi NP_001074549.1. NM_001081080.1.
XP_006495899.1. XM_006495836.1.
XP_006495900.1. XM_006495837.1.
UniGenei Mm.194486.
Mm.486727.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000088310 ; ENSMUSP00000085650 ; ENSMUSG00000048874 .
GeneIDi 213109.
KEGGi mmu:213109.
UCSCi uc007ane.1. mouse.

Organism-specific databases

CTDi 23469.
MGIi MGI:2446126. Phf3.

Phylogenomic databases

GeneTreei ENSGT00530000063844.
HOGENOMi HOG000060123.
HOVERGENi HBG039623.
InParanoidi B2RQG2.
OMAi QMPCSTV.
OrthoDBi EOG7NW685.
TreeFami TF350578.

Miscellaneous databases

ChiTaRSi PHF3. mouse.
NextBioi 373859.
PROi B2RQG2.
SOURCEi Search...

Gene expression databases

Genevestigatori B2RQG2.

Family and domain databases

Gene3Di 1.10.472.30. 1 hit.
3.30.40.10. 1 hit.
InterProi IPR012921. SPOC_C.
IPR003618. TFIIS_cen_dom.
IPR017890. TFS2M.
IPR019786. Zinc_finger_PHD-type_CS.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR019787. Znf_PHD-finger.
IPR013083. Znf_RING/FYVE/PHD.
[Graphical view ]
Pfami PF00628. PHD. 1 hit.
PF07744. SPOC. 1 hit.
PF07500. TFIIS_M. 1 hit.
[Graphical view ]
SMARTi SM00249. PHD. 1 hit.
SM00510. TFS2M. 1 hit.
[Graphical view ]
SUPFAMi SSF46942. SSF46942. 1 hit.
SSF57903. SSF57903. 1 hit.
PROSITEi PS51321. TFIIS_CENTRAL. 1 hit.
PS01359. ZF_PHD_1. 1 hit.
PS50016. ZF_PHD_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: BrainImported.
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  4. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiB2RQG2_MOUSE
AccessioniPrimary (citable) accession number: B2RQG2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: May 14, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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