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B2RPG6 (B2RPG6_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Zinc finger, CCHC domain containing 2 EMBL AAI37436.1
Gene names
Name:ZCCHC2 Ensembl ENSP00000464791 EMBL AAI37436.1
OrganismHomo sapiens (Human) [Reference proteome] EMBL AAI37436.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length857 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
B2RPG6 [UniParc].

Last modified July 1, 2008. Version 1.
Checksum: 95C7A36B05B0B2F1

FASTA85791,738
        10         20         30         40         50         60 
MQNNESSLIE QAPIPQDGLT VAPHRAQREA VHIEKIMLKG VQRKRADKYW EYTFKVNWSD 

        70         80         90        100        110        120 
LSVTTVTKTH QELQEFLLKL PKELSSETFD KTILRALNQG SLKREERRHP DLEPILRQLF 

       130        140        150        160        170        180 
SSSSQAFLQS QKVHSFFQSI SSDSLHSINN LQSSLKTSKI LEHLKEDSSE ASSQEEDVLQ 

       190        200        210        220        230        240 
HAIIHKKHTG KSPIVNNIGT SCSPLDGLTM QYSEQNGIVD WRKQSCTTIQ HPEHCVTSAD 

       250        260        270        280        290        300 
QHSAEKRSLS SINKKKGKPQ TEKEKIKKTD NRLNSRINGI RLSTPQHAHG GTVKDVNLDI 

       310        320        330        340        350        360 
GSGHDTCGET SSESYSSPSS PRHDGRESFE SEEEKDRDTD SNSEDSGNPS TTRFTGYGSV 

       370        380        390        400        410        420 
NQTVTVKPPV QIASLGNENG NLLEDPLNSP KYQHISFMPT LHCVMHNGAQ KSEVVVPAPK 

       430        440        450        460        470        480 
PADGKTIGML VPSPVAISAI RESANSTPVG ILGPTACTGE SEKHLELLAS PLPIPSTFLP 

       490        500        510        520        530        540 
HSSTPALHLT VQRLKLPPPQ GSSESCTVNI PQQPPGSLSI ASPNTAFIPI HNPGSFPGSP 

       550        560        570        580        590        600 
VATTDPITKS ASQVVGLNQM VPQIEGNTGT VPQPTNVKVV LPAAGLSAAQ PPASYPLPGS 

       610        620        630        640        650        660 
PLAAGVLPSQ NSSVLSTAAT SPQPASAGIS QAQATVPPAV PTHTPGPAPS PSPALTHSTA 

       670        680        690        700        710        720 
QSDSTSYISA VGNTNANGTV VPPQQMGSGP CGSCGRRCSC GTNGNLQLNS YYYPNPMPGP 

       730        740        750        760        770        780 
MYRVPSFFTL PSICNGSYLN QAHQSNGNQL PFFLPQTPYA NGLVHDPVMG SQANYGMQQM 

       790        800        810        820        830        840 
AGFGRFYPVY PAPNVVANTS GSGPKKNGNV SCYNCGVSGH YAQDCKQSSM EANQQGTYRL 

       850 
RYAPPLPPSN DTLDSAD 

« Hide

References

« Hide 'large scale' references
[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Brain EMBL AAI37436.1.
[2]"DNA sequence and analysis of human chromosome 18."
Nusbaum C., Zody M.C., Borowsky M.L., Kamal M., Kodira C.D., Taylor T.D., Whittaker C.A., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Yang X., Abouelleil A., Allen N.R., Anderson S., Bloom T., Bugalter B., Butler J. expand/collapse author list , Cook A., DeCaprio D., Engels R., Garber M., Gnirke A., Hafez N., Hall J.L., Norman C.H., Itoh T., Jaffe D.B., Kuroki Y., Lehoczky J., Lui A., Macdonald P., Mauceli E., Mikkelsen T.S., Naylor J.W., Nicol R., Nguyen C., Noguchi H., O'Leary S.B., O'Neill K., Piqani B., Smith C.L., Talamas J.A., Topham K., Totoki Y., Toyoda A., Wain H.M., Young S.K., Zeng Q., Zimmer A.R., Fujiyama A., Hattori M., Birren B.W., Sakaki Y., Lander E.S.
Nature 437:551-555(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[3]Ensembl
Submitted (NOV-2012) to UniProtKB
Cited for: IDENTIFICATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC064801 Genomic DNA. No translation available.
BC137435 mRNA. Translation: AAI37436.1.
UniGeneHs.114191.
Hs.714637.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000586834; ENSP00000464791; ENSG00000141664.

Organism-specific databases

HGNCHGNC:22916. ZCCHC2.
GenAtlasSearch...

Phylogenomic databases

HOVERGENHBG108762.

Family and domain databases

Gene3D3.30.1520.10. 1 hit.
4.10.60.10. 1 hit.
InterProIPR001683. Phox.
IPR001878. Znf_CCHC.
[Graphical view]
PfamPF00098. zf-CCHC. 1 hit.
[Graphical view]
SMARTSM00343. ZnF_C2HC. 1 hit.
[Graphical view]
SUPFAMSSF57756. SSF57756. 1 hit.
SSF64268. SSF64268. 1 hit.
PROSITEPS50158. ZF_CCHC. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio35468383.

Entry information

Entry nameB2RPG6_HUMAN
AccessionPrimary (citable) accession number: B2RPG6
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: April 16, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.