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Protein

50S ribosomal protein L23

Gene

rplW

Organism
Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / CIP 103683 / JCM 12257 / NCTC 11834 / 2561)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.UniRule annotation

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported, RNA-binding, rRNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L23UniRule annotation
Gene namesi
Name:rplWUniRule annotationImported
Ordered Locus Names:PGN_1866Imported
OrganismiPorphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / CIP 103683 / JCM 12257 / NCTC 11834 / 2561)Imported
Taxonomic identifieri431947 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesPorphyromonadaceaePorphyromonas
Proteomesi
  • UP000008842 Componenti: Chromosome

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome.UniRule annotation

Protein-protein interaction databases

STRINGi431947.PGN_1866

Structurei

3D structure databases

ProteinModelPortaliB2RLZ0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL23 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG41081DX Bacteria
COG0089 LUCA
HOGENOMiHOG000231366
KOiK02892
OMAiTMNPPRR

Family and domain databases

Gene3Di3.30.70.330, 1 hit
HAMAPiMF_01369_B Ribosomal_L23_B, 1 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR012678 Ribosomal_L23/L15e_core_dom_sf
IPR001014 Ribosomal_L23/L25_CS
IPR013025 Ribosomal_L25/23
PfamiView protein in Pfam
PF00276 Ribosomal_L23, 1 hit
SUPFAMiSSF54189 SSF54189, 1 hit
PROSITEiView protein in PROSITE
PS00050 RIBOSOMAL_L23, 1 hit

Sequencei

Sequence statusi: Complete.

B2RLZ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGIIIKPIIS EKMTAVTEKM SERYGFRVSP NANKIEIKKA VEAMYNVKVE
60 70 80 90
DVNTMRYDGK RKNRYTKSGL IRGKEASFKK AIVTLKKGET IDFFSNI
Length:97
Mass (Da):11,095
Last modified:July 1, 2008 - v1
Checksum:iB736B46FCF1ED169
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009380 Genomic DNA Translation: BAG34385.1
RefSeqiWP_004583596.1, NC_010729.1

Genome annotation databases

GeneIDi29257017
KEGGipgn:PGN_1866

Similar proteinsi

Entry informationi

Entry nameiB2RLZ0_PORG3
AccessioniPrimary (citable) accession number: B2RLZ0
Entry historyiIntegrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: April 25, 2018
This is version 62 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
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Main funding by: National Institutes of Health