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B2RIR3 (B2RIR3_PORG3) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glutamate racemase HAMAP MF_00258
EC=5.1.1.3 HAMAP MF_00258
Gene names
Name:murI HAMAP MF_00258
Ordered Locus Names:PGN_0739
OrganismPorphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) [Complete proteome] [HAMAP]
Taxonomic identifier431947 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Bacteroidia › Bacteroidales › Porphyromonadaceae › Porphyromonas

Protein attributes

Sequence length274 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Provides the (R)-glutamate required for cell wall biosynthesis By similarity. HAMAP MF_00258 SAAS SAAS015942

Catalytic activity

L-glutamate = D-glutamate. HAMAP MF_00258 SAAS SAAS015942

Pathway

Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_00258 SAAS SAAS015942

Sequence similarities

Belongs to the aspartate/glutamate racemases family. HAMAP MF_00258

Sequences

Sequence LengthMass (Da)Tools
B2RIR3 [UniParc].

Last modified July 1, 2008. Version 1.
Checksum: E533FC1A8C4923B0

FASTA27430,796
        10         20         30         40         50         60 
MNSSIGIFDS GYGGLTILSE IRRLMPEYNF VYLGDNARSP YGNRSYEVVY KFTLQAVRKL 

        70         80         90        100        110        120 
FELGCPLVIL ACNTASAKAL RTIQQRDLPN MEDPTRRVLG IIRPTVEAVD EITRTKHVGV 

       130        140        150        160        170        180 
LATQGTVSSH SYQLEIAKLF PEISVTEEAC PMWVPLVETG ESDSPGADYF IRKHLDSIIA 

       190        200        210        220        230        240 
KDDTIDTIIL ACTHYPLLRP KMKRLLTPTI KLIAQGELVA HSLKDYLSRH PEMDRRIEKG 

       250        260        270 
GKTSYYTTES PDKFGELASL FLKEEVEAEH VTID

« Hide

References

[1]"Determination of the genome sequence of Porphyromonas gingivalis strain ATCC 33277 and genomic comparison with strain W83 revealed extensive genome rearrangements in P. gingivalis."
Naito M., Hirakawa H., Yamashita A., Ohara N., Shoji M., Yukitake H., Nakayama K., Toh H., Yoshimura F., Kuhara S., Hattori M., Hayashi T., Nakayama K.
DNA Res. 15:215-225(2008) [PubMed: 18524787] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 33277 / DSM 20709 / JCM 12257.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP009380 Genomic DNA. Translation: BAG33258.1.
RefSeqYP_001928855.1. NC_010729.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB2RIR3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6329426.
GenomeReviewsGene locus PGN_0739 in contig AP009380_GR.
KEGGpgn:PGN_0739.
PATRIC22974410. VBIPorGin26334_0725.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG645102.
OMAPQEDTIY.
ProtClustDBCLSK823616.

Family and domain databases

HAMAPMF_00258. Glu_racemase.
[Tree]
InterProIPR015942. Asp/Glu/hydantoin_racemase.
IPR001920. Asp/Glu_race.
IPR018187. Asp/Glu_racemase_AS.
IPR004391. Glu_race.
[Graphical view]
Gene3DG3DSA:3.40.50.1860. Asp/Glu_race. 1 hit.
KOK01776.
PANTHERPTHR21198. PTHR21198. 1 hit.
PfamPF01177. Asp_Glu_race. 1 hit.
[Graphical view]
SUPFAMSSF53681. Asp/Glu_race. 2 hits.
TIGRFAMsTIGR00067. Glut_race. 1 hit.
PROSITEPS00923. ASP_GLU_RACEMASE_1. 1 hit.
PS00924. ASP_GLU_RACEMASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2RIR3_PORG3
AccessionPrimary (citable) accession number: B2RIR3
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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