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Protein
Submitted name:

Epididymis luminal protein 112

Gene

RPS27A

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
Epididymis luminal protein 112Imported
Submitted name:
Ribosomal protein S27a, isoform CRA_cImported
Submitted name:
cDNA, FLJ96793, Homo sapiens ribosomal protein S27a (RPS27A), mRNAImported
Gene namesi
Name:RPS27AImported
Synonyms:HEL112Imported
ORF Names:hCG_1987923Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA34821.

Expressioni

Gene expression databases

BgeeiENSG00000143947.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000272317.

Structurei

3D structure databases

SMRiB2RDW1. Positions 1-76, 82-152.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 7676Ubiquitin-likeInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG0004. Eukaryota.
COG5272. LUCA.
HOVERGENiHBG057823.
KOiK02977.
OMAiMSILKYY.
OrthoDBiEOG091G178I.
PhylomeDBiB2RDW1.

Family and domain databases

InterProiIPR002906. Ribosomal_S27a.
IPR011332. Ribosomal_zn-bd.
IPR019956. Ubiquitin.
IPR029071. Ubiquitin-rel_dom.
IPR019954. Ubiquitin_CS.
IPR000626. Ubiquitin_dom.
[Graphical view]
PfamiPF01599. Ribosomal_S27. 1 hit.
PF00240. ubiquitin. 1 hit.
[Graphical view]
PRINTSiPR00348. UBIQUITIN.
SMARTiSM01402. Ribosomal_S27. 1 hit.
SM00213. UBQ. 1 hit.
[Graphical view]
SUPFAMiSSF54236. SSF54236. 1 hit.
SSF57829. SSF57829. 1 hit.
PROSITEiPS00299. UBIQUITIN_1. 1 hit.
PS50053. UBIQUITIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B2RDW1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQIFVKTLTG KTITLEVEPS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL
60 70 80 90 100
EDGRTLSDYN IQKESTLHLV LRLRGGAKKR KKKSYTTPKK NKHKRKKVKL
110 120 130 140 150
AVLKYYKVDE NGKISRLRRE CPSDECGAGV FMASHFDRHY CGKCCLTYCF

NKPEDK
Length:156
Mass (Da):17,965
Last modified:July 1, 2008 - v1
Checksum:i617BC63DF3A904F7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU794671 mRNA. Translation: ACJ13725.1.
AK315695 mRNA. Translation: BAG38058.1.
CH471053 Genomic DNA. Translation: EAX00108.1.
CH471053 Genomic DNA. Translation: EAX00110.1.
RefSeqiNP_001129064.1. NM_001135592.2.
NP_001170884.1. NM_001177413.1.
NP_002945.1. NM_002954.5.
UniGeneiHs.311640.
Hs.546292.
Hs.743392.

Genome annotation databases

GeneIDi6233.
KEGGihsa:6233.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU794671 mRNA. Translation: ACJ13725.1.
AK315695 mRNA. Translation: BAG38058.1.
CH471053 Genomic DNA. Translation: EAX00108.1.
CH471053 Genomic DNA. Translation: EAX00110.1.
RefSeqiNP_001129064.1. NM_001135592.2.
NP_001170884.1. NM_001177413.1.
NP_002945.1. NM_002954.5.
UniGeneiHs.311640.
Hs.546292.
Hs.743392.

3D structure databases

SMRiB2RDW1. Positions 1-76, 82-152.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000272317.

Protocols and materials databases

DNASUi6233.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi6233.
KEGGihsa:6233.

Organism-specific databases

CTDi6233.
PharmGKBiPA34821.

Phylogenomic databases

eggNOGiKOG0004. Eukaryota.
COG5272. LUCA.
HOVERGENiHBG057823.
KOiK02977.
OMAiMSILKYY.
OrthoDBiEOG091G178I.
PhylomeDBiB2RDW1.

Miscellaneous databases

ChiTaRSiRPS27A. human.
GenomeRNAii6233.

Gene expression databases

BgeeiENSG00000143947.

Family and domain databases

InterProiIPR002906. Ribosomal_S27a.
IPR011332. Ribosomal_zn-bd.
IPR019956. Ubiquitin.
IPR029071. Ubiquitin-rel_dom.
IPR019954. Ubiquitin_CS.
IPR000626. Ubiquitin_dom.
[Graphical view]
PfamiPF01599. Ribosomal_S27. 1 hit.
PF00240. ubiquitin. 1 hit.
[Graphical view]
PRINTSiPR00348. UBIQUITIN.
SMARTiSM01402. Ribosomal_S27. 1 hit.
SM00213. UBQ. 1 hit.
[Graphical view]
SUPFAMiSSF54236. SSF54236. 1 hit.
SSF57829. SSF57829. 1 hit.
PROSITEiPS00299. UBIQUITIN_1. 1 hit.
PS50053. UBIQUITIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB2RDW1_HUMAN
AccessioniPrimary (citable) accession number: B2RDW1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: September 7, 2016
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.