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Protein
Submitted name:

cDNA, FLJ95843, highly similar to Homo sapiens small nuclear RNA activating complex, polypeptide 1, 43kDa (SNAPC1), mRNA

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA, FLJ95843, highly similar to Homo sapiens small nuclear RNA activating complex, polypeptide 1, 43kDa (SNAPC1), mRNAImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA35982.

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG058831.
KOiK15208.

Family and domain databases

InterProiIPR019188. SNAPc_SNAP43.
[Graphical view]
PANTHERiPTHR15131. PTHR15131. 1 hit.
PfamiPF09808. SNAPc_SNAP43. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B2RC42-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGTPPGLQTD CEALLSRFQE TDSVRFEDFT ELWKNMKFGT IFCGRMRNLE
60 70 80 90 100
KNMFTKEALA LAWRYFLPPY TFQIRVGALY LLYGLYNTQL CQPKQKIRVA
110 120 130 140 150
LKDWDEVLKF QQDLVNAQHF DAAYIFRKLR LDRAFHFTAM PKLLSYRMKK
160 170 180 190 200
KIHRAEVTEE FKDPSDRVMK LITSDVLEEM LNVHDHYQNM KHVISVDKSK
210 220 230 240 250
PDKALSLIKD DFFDNIKNIV LEHQQWHKDR KNPSLKSKTN DGEEKMEGNS
260 270 280 290 300
QETERCERAE SLAKIKSKAF SVVIQASKSR RHRQVKLDSS DSDSASGQGQ
310 320 330 340 350
VKATRKKEKK ERLKPAGRKM SLRNKGNVQN IHKEDKPLSL SMPVITEEEE
360
NESLSGTEFT ASKKRRKH
Length:368
Mass (Da):42,966
Last modified:July 1, 2008 - v1
Checksum:i4EDE4282701727C6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK314933 mRNA. Translation: BAG37439.1.
RefSeqiNP_003073.1. NM_003082.3.
UniGeneiHs.179312.

Genome annotation databases

GeneIDi6617.
KEGGihsa:6617.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK314933 mRNA. Translation: BAG37439.1.
RefSeqiNP_003073.1. NM_003082.3.
UniGeneiHs.179312.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

DNASUi6617.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi6617.
KEGGihsa:6617.

Organism-specific databases

CTDi6617.
PharmGKBiPA35982.

Phylogenomic databases

HOVERGENiHBG058831.
KOiK15208.

Miscellaneous databases

GenomeRNAii6617.
NextBioi25767.

Family and domain databases

InterProiIPR019188. SNAPc_SNAP43.
[Graphical view]
PANTHERiPTHR15131. PTHR15131. 1 hit.
PfamiPF09808. SNAPc_SNAP43. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "NEDO functional analysis of protein and research application project."
    Wakamatsu A., Yamamoto J., Kimura K., Kaida T., Tsuchiya K., Iida Y., Takayama Y., Murakawa K., Kanehori K., Andoh T., Kagawa N., Sato R., Kawamura Y., Tanaka S., Kisu Y., Sugano S., Goshima N., Nomura N., Isogai T.
    Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: CervixImported.

Entry informationi

Entry nameiB2RC42_HUMAN
AccessioniPrimary (citable) accession number: B2RC42
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: October 1, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.