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Protein
Submitted name:

cDNA, FLJ93580, highly similar to Homo sapiens TRAF family member-associated NFKB activator (TANK), transcript variant 1, mRNA

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA, FLJ93580, highly similar to Homo sapiens TRAF family member-associated NFKB activator (TANK), transcript variant 1, mRNAImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

PRIDEiB2R7S3.

Expressioni

Gene expression databases

GenevisibleiB2R7S3. HS.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000259075.

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG019299.
KOiK12650.

Family and domain databases

InterProiIPR024581. TBD.
[Graphical view]
PfamiPF12845. TBD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B2R7S3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDKNIGEQLN KAYEAFRQAC MDRDSAVKEL QQKTENYEQR IREQQEQLSL
60 70 80 90 100
QQTIIDKLKS QLLLVNSTQD NNYGCVPLLE DSETRKNNLT LDQPQDKVIS
110 120 130 140 150
GIAREKLPKV RRQEVSSPRK ETSARSLGSP LLHERGNIEK AFWDLKEEFH
160 170 180 190 200
KICMLAKAQK DHLSKLNIPD TATETQCSVP IQCTDKTDKQ EALFKPQAKD
210 220 230 240 250
DINRGAPSIT SVTPRGLCRD EEDTSFESLS KFNVKFPPMD NDSTFLHSTP
260 270 280 290 300
ERPGILSPAT SEAVCQEKFN MEFRDNPGNF VKTEETLFEI QGIDPIASAI
310 320 330 340 350
QNLKTTDKTK PSNLVNTCIR TTLDRAACLP PGDHNALYVN SFPLLDPSDA
360 370 380 390 400
PFPSLDSPGK AIRGPQQPIW KPFPNQDSDS VVLSGTDSEL HIPRVCEFCQ
410 420
AVFPPSITSR GDFLRHLNSH FNGET
Length:425
Mass (Da):47,786
Last modified:July 1, 2008 - v1
Checksum:i7D3BEBAE06BA62EE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK313096 mRNA. Translation: BAG35920.1.
RefSeqiNP_001186064.1. NM_001199135.1.
UniGeneiHs.132257.

Genome annotation databases

GeneIDi10010.
KEGGihsa:10010.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK313096 mRNA. Translation: BAG35920.1.
RefSeqiNP_001186064.1. NM_001199135.1.
UniGeneiHs.132257.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000259075.

Proteomic databases

PRIDEiB2R7S3.

Protocols and materials databases

DNASUi10010.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi10010.
KEGGihsa:10010.

Organism-specific databases

CTDi10010.

Phylogenomic databases

HOVERGENiHBG019299.
KOiK12650.

Miscellaneous databases

GenomeRNAii10010.
NextBioi37817.

Gene expression databases

GenevisibleiB2R7S3. HS.

Family and domain databases

InterProiIPR024581. TBD.
[Graphical view]
PfamiPF12845. TBD. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "NEDO functional analysis of protein and research application project."
    Wakamatsu A., Yamamoto J., Kimura K., Kaida T., Tsuchiya K., Iida Y., Takayama Y., Murakawa K., Kanehori K., Andoh T., Kagawa N., Sato R., Kawamura Y., Tanaka S., Kisu Y., Sugano S., Goshima N., Nomura N., Isogai T.
    Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: ThalamusImported.

Entry informationi

Entry nameiB2R7S3_HUMAN
AccessioniPrimary (citable) accession number: B2R7S3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: June 24, 2015
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.