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B2KEM6 (B2KEM6_ELUMP) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
Ordered Locus Names:Emin_1423 EMBL ACC98972.1, Emin_1498 EMBL ACC99046.1
OrganismElusimicrobium minutum (strain Pei191) [Complete proteome] [HAMAP] EMBL ACC98972.1
Taxonomic identifier445932 [NCBI]
Taxonomic lineageBacteriaElusimicrobiaElusimicrobiaElusimicrobialesElusimicrobiaceaeElusimicrobium

Protein attributes

Sequence length395 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding83 – 875GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding138 – 1414GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
B2KEM6 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: 712371161150BD18

FASTA39542,995
        10         20         30         40         50         60 
MAKEKFVRTK PHVNVGTIGH VDHGKTTLTT ALTKVLAKEG KAKEMGYADI AKGGVVRDAS 

        70         80         90        100        110        120 
KIVTVAVSHV EYESDKRHYA HIDCPGHADY IKNMITGAAQ MDGAILVVSA QDGPMPQTRE 

       130        140        150        160        170        180 
HVLLAKQVNV PKLVVFLNKV DLADAELLDL VEMEIRDLLS KYEFDGDNTP IIRGSALKAI 

       190        200        210        220        230        240 
EGDSSPIGEP SIKALLEALD TWIPEPKRET DKPFLMAVED VFSITGRGTV ATGRIERGVV 

       250        260        270        280        290        300 
KVGDTIEIIG FRDTMNTVAT GIEMFRKLLD QGEAGDNVGV LLRGVEKNQI ERGQVLAAPK 

       310        320        330        340        350        360 
SIKPHTKFKG QVYILKKDEG GRHTPLTPGY KPQFYFRTTD VTGELKFAGD MIMPGDNAEI 

       370        380        390 
EVTLITPVAM EEGLRFAIRE GGRTVGAGVV TKVIE 

« Hide

References

« Hide 'large scale' references
[1]US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Pitluck S., Sun H., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Herlemann D.P.R., Geissinger O., Ikeda-Ohtsubo W., Kunin V., Humgenholtz P., Brune A., Richardson P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Pei191 EMBL ACC98972.1.
[2]"Genomic analysis of 'Elusimicrobium minutum,' the first cultivated representative of the phylum 'Elusimicrobia' (formerly termite group 1)."
Herlemann D.P., Geissinger O., Ikeda-Ohtsubo W., Kunin V., Sun H., Lapidus A., Hugenholtz P., Brune A.
Appl. Environ. Microbiol. 75:2841-2849(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Pei191 EMBL ACC98972.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001055 Genomic DNA. Translation: ACC98972.1.
CP001055 Genomic DNA. Translation: ACC99046.1.
RefSeqYP_001876309.1. NC_010644.1.
YP_001876383.1. NC_010644.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING445932.Emin_1498.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACC98972; ACC98972; Emin_1423.
ACC99046; ACC99046; Emin_1498.
GeneID6263753.
6263947.
KEGGemi:Emin_1423.
emi:Emin_1498.
PATRIC21850094. VBIEluMin86178_1470.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0050.
HOGENOMHOG000229290.
KOK02358.
OMAVTPHTEF.
OrthoDBEOG6R5C6X.
ProtClustDBPRK00049.

Enzyme and pathway databases

BioCycEMIN445932:GHM0-1461-MONOMER.
EMIN445932:GHM0-1542-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB2KEM6_ELUMP
AccessionPrimary (citable) accession number: B2KEM6
Entry history
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: April 16, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)