B2KEF5 (B2KEF5_ELUMP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycine dehydrogenase (Decarboxylating) EMBL ACC98901.1
EC=1.4.4.2 EMBL ACC98901.1

Gene names

Ordered Locus Names:

Emin_1351 EMBL ACC98901.1

Organism

Elusimicrobium minutum (strain Pei191) [Complete proteome] [HAMAP] EMBL ACC98901.1

Taxonomic identifier

445932 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Elusimicrobia › Elusimicrobia › Elusimicrobiales › Elusimicrobiaceae › Elusimicrobium › Elusimicrobium minutum

Protein attributes

Sequence length	482 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO2 is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein By similarity. SAAS SAAS020580
Catalytic activity	Glycine + H-protein-lipoyllysine = H-protein-S-aminomethyldihydrolipoyllysine + CO2. SAAS SAAS020580
Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS020580
Subunit structure	The glycine cleavage system is composed of four proteins: P, T, L and H. In this organism, the P 'protein' is a heterodimer of two subunits By similarity. SAAS SAAS020580

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS020580
Molecular function	Oxidoreductase SAAS SAAS020580 EMBL ACC98901.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glycine catabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glycine dehydrogenase (decarboxylating) activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B2KEF5 [UniParc]. Last modified June 10, 2008. Version 1. Checksum: 6B8D8C208E47E18C	FASTA	482	52,770
	10 20 30 40 50 60 MIKPQSKLSI EKSTEGKKGV ALPELCKEAS KFLPENLMRK EKPVLPEMSE FEVVRHFTNL 70 80 90 100 110 120 SRKNYSLDTH FYPLGSCTMK YNPRAYEAAA AEPSFSSAHP FADANLAQGT LELMYNLERG 130 140 150 160 170 180 LSEICGFHSF TLQPAAGAHG EWTGVLIAKA YHAKNNDLNR TEVIVPDTAH GTNPATANMA 190 200 210 220 230 240 GLKVVNIKSG ADGCVDLEAL KEVLGPKTAL VMLTVPNTAG LFEKDIKEIA DMVHDAGSLL 250 260 270 280 290 300 YMDGANFNAL IGLAKPGEIG ADILHLNLHK TFSTPHGGGG PGSGAVGVAE HLAEFLPGPI 310 320 330 340 350 360 VVKNEKTGFF TLACPGPLSI GRVKAFYGNI AVLVKTYCYI KQHDGDTLKE IAQNAILNAN 370 380 390 400 410 420 YIKEKLKDFY PSFFDSVCMH ECVLTINKEK FKNVKTLDVA KRLLDYGFYA PTIYFPLIVP 430 440 450 460 470 480 EAMMIEPTET ESKNTIDRFA DAMISIYEEA VKTPELVTNA PQTQPVKRID EVSAAREPNL RW

References

[1]

"Genomic analysis of "Elusimicrobium minutum," the first cultivated representative of the phylum "Elusimicrobia" (formerly termite group 1)." Herlemann D.P., Geissinger O., Ikeda-Ohtsubo W., Kunin V., Sun H., Lapidus A., Hugenholtz P., Brune A. Appl. Environ. Microbiol. 75:2841-2849(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Pei191 EMBL ACC98901.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001055 Genomic DNA. Translation: ACC98901.1.
RefSeq	YP_001876238.1. NC_010644.1.
3D structure databases
ProteinModelPortal	B2KEF5.
ModBase	Search...
Protein-protein interaction databases
STRING	445932.Emin_1351.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACC98901; ACC98901; Emin_1351.
GeneID	6263773.
KEGG	emi:Emin_1351.
PATRIC	21849948. VBIEluMin86178_1397.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1003.
HOGENOM	HOG000239368.
KO	K00283.
OMA	RHYTRLS.
ProtClustDB	PRK04366.
Enzyme and pathway databases
BioCyc	EMIN445932:GHM0-1389-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR020580. GDC-P_N. IPR020581. GDC_P. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11773. PTHR11773. 1 hit.
Pfam	PF02347. GDC-P. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B2KEF5_ELUMP

Accession

Primary (citable) accession number: B2KEF5

Entry history

Integrated into UniProtKB/TrEMBL:	June 10, 2008
Last sequence update:	June 10, 2008
Last modified:	May 29, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)