B2K143 (B2K143_YERPB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Type III secretion outer membrane pore, YscC/HrcC family EMBL ACC87325.1

Gene names

Ordered Locus Names:

YPTS_0336 EMBL ACC87325.1

Organism

Yersinia pseudotuberculosis serotype IB (strain PB1/+) [Complete proteome] [HAMAP] EMBL ACC87325.1

Taxonomic identifier

502801 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Yersinia › Yersinia pseudotuberculosis

Protein attributes

Sequence length	505 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Cell outer membrane By similarity RuleBase RU004004.
Sequence similarities	Belongs to the GSP D family. RuleBase RU004003

Ontologies

Keywords
Biological process	Transport RuleBase RU004004
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	protein secretion Inferred from electronic annotation. Source: InterPro
Cellular_component	cell outer membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	protein transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B2K143 [UniParc]. Last modified June 10, 2008. Version 1. Checksum: 0554CC3CEDABD492	FASTA	505	55,700
	10 20 30 40 50 60 MSLIYIMRKI TGLILLFFAT LLPYGKFSYG KAIPWQGEPF FIYSRGMTVS ELLKDLGMNY 70 80 90 100 110 120 GIPVVISSEI NEHFTGKIRD KTPEKILSEL AGRYNITWYY DGETLYFYPV QSIKREFISP 130 140 150 160 170 180 DGLAANTLVK YLQRGDVLAG KNCAIKAIPH LDTLEVKGVP ICIERVKSVS KMLSEQVRHQ 190 200 210 220 230 240 NQNKETVKVF PLKYASAADS DYQYRDQNVR LPGLVSVLRE LNQGNNLPLA GGNQPDGNQA 250 260 270 280 290 300 SSPVFSADPR QNAVIIRDRQ ANMPIYRSLI TQLDQRPIQI EISVTIIDVD AGDISQLGVD 310 320 330 340 350 360 WSASASIGGT GVSFNSTFAK NNAEGFSTVI GDTGNFMVRL NALQKNSRAR ILSQPSVVTL 370 380 390 400 410 420 NNIQAVLDKN VTFYTKLQGE KVAKLESVTS GSLLRVTPRM IETEGVQEVL LNLNIQDGQQ 430 440 450 460 470 480 QASTNSNEPL PEIRNSDIST QATLQVGQSL LLGGFIQDTQ IESQNKIPLL GDIPLLGGLF 490 500 RSTDKQSHSV VRLFLIKAVP VNAGE

References

[1]

"Complete sequence of Yersinia pseudotuberculosis PB1/+." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Schmutz J., Larimer F., Land M., Hauser L. , Challacombe J.F., Green L., Lindler L.E., Nikolich M.P., Richardson P. Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PB1/+.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001048 Genomic DNA. Translation: ACC87325.1.
RefSeq	YP_001870782.1. NC_010634.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	502801.YPTS_0336.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACC87325; ACC87325; YPTS_0336.
GeneID	6260852.
KEGG	ypb:YPTS_0336.
PATRIC	18648207. VBIYerPse20639_0351.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1450.
HOGENOM	HOG000245123.
KO	K03219.
OMA	NDDEVRL.
ProtClustDB	PRK15346.
Family and domain databases
InterPro	IPR005644. NolW-like. IPR004846. T2SS/T3SS. IPR004845. T2SS_GspD_CS. IPR003522. T3SS_OM_pore_YscC. [Graphical view]
Pfam	PF00263. Secretin. 1 hit. PF03958. Secretin_N. 1 hit. [Graphical view]
PRINTS	PR01337. TYPE3OMGPROT.
TIGRFAMs	TIGR02516. type_III_yscC. 1 hit.
PROSITE	PS00875. T2SP_D. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B2K143_YERPB

Accession

Primary (citable) accession number: B2K143

Entry history

Integrated into UniProtKB/TrEMBL:	June 10, 2008
Last sequence update:	June 10, 2008
Last modified:	May 1, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)