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B2K143

- B2K143_YERPB

UniProt

B2K143 - B2K143_YERPB

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Protein
Submitted name: Type III secretion outer membrane pore, YscC/HrcC family
Gene
YPTS_0336
Organism
Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. protein transporter activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. protein secretion Source: InterPro
Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Enzyme and pathway databases

BioCyciYPSE502801:GHIH-434-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Type III secretion outer membrane pore, YscC/HrcC familyImported
Gene namesi
Ordered Locus Names:YPTS_0336Imported
OrganismiYersinia pseudotuberculosis serotype IB (strain PB1/+)Imported
Taxonomic identifieri502801 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
ProteomesiUP000001193: Chromosome

Subcellular locationi

Cell outer membrane By similarity UniRule annotation

GO - Cellular componenti

  1. cell outer membrane Source: UniProtKB-SubCell
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi502801.YPTS_0336.

Family & Domainsi

Sequence similaritiesi

Belongs to the GSP D family.

Phylogenomic databases

eggNOGiCOG1450.
HOGENOMiHOG000245123.
KOiK03219.
OMAiTSTYYIQ.
OrthoDBiEOG6423BN.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B2K143-1 [UniParc]FASTAAdd to Basket

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MSLIYIMRKI TGLILLFFAT LLPYGKFSYG KAIPWQGEPF FIYSRGMTVS    50
ELLKDLGMNY GIPVVISSEI NEHFTGKIRD KTPEKILSEL AGRYNITWYY 100
DGETLYFYPV QSIKREFISP DGLAANTLVK YLQRGDVLAG KNCAIKAIPH 150
LDTLEVKGVP ICIERVKSVS KMLSEQVRHQ NQNKETVKVF PLKYASAADS 200
DYQYRDQNVR LPGLVSVLRE LNQGNNLPLA GGNQPDGNQA SSPVFSADPR 250
QNAVIIRDRQ ANMPIYRSLI TQLDQRPIQI EISVTIIDVD AGDISQLGVD 300
WSASASIGGT GVSFNSTFAK NNAEGFSTVI GDTGNFMVRL NALQKNSRAR 350
ILSQPSVVTL NNIQAVLDKN VTFYTKLQGE KVAKLESVTS GSLLRVTPRM 400
IETEGVQEVL LNLNIQDGQQ QASTNSNEPL PEIRNSDIST QATLQVGQSL 450
LLGGFIQDTQ IESQNKIPLL GDIPLLGGLF RSTDKQSHSV VRLFLIKAVP 500
VNAGE 505
Length:505
Mass (Da):55,700
Last modified:June 10, 2008 - v1
Checksum:i0554CC3CEDABD492
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001048 Genomic DNA. Translation: ACC87325.1.
RefSeqiYP_001870782.1. NC_010634.1.

Genome annotation databases

EnsemblBacteriaiACC87325; ACC87325; YPTS_0336.
GeneIDi6260852.
KEGGiypb:YPTS_0336.
PATRICi18648207. VBIYerPse20639_0351.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001048 Genomic DNA. Translation: ACC87325.1 .
RefSeqi YP_001870782.1. NC_010634.1.

3D structure databases

ModBasei Search...

Protein-protein interaction databases

STRINGi 502801.YPTS_0336.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACC87325 ; ACC87325 ; YPTS_0336 .
GeneIDi 6260852.
KEGGi ypb:YPTS_0336.
PATRICi 18648207. VBIYerPse20639_0351.

Phylogenomic databases

eggNOGi COG1450.
HOGENOMi HOG000245123.
KOi K03219.
OMAi TSTYYIQ.
OrthoDBi EOG6423BN.

Enzyme and pathway databases

BioCyci YPSE502801:GHIH-434-MONOMER.

Family and domain databases

InterProi IPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view ]
Pfami PF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view ]
PRINTSi PR01337. TYPE3OMGPROT.
TIGRFAMsi TIGR02516. type_III_yscC. 1 hit.
PROSITEi PS00875. T2SP_D. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Yersinia pseudotuberculosis PB1/+."
    Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Schmutz J., Larimer F., Land M., Hauser L.
    , Challacombe J.F., Green L., Lindler L.E., Nikolich M.P., Richardson P.
    Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PB1/+.

Entry informationi

Entry nameiB2K143_YERPB
AccessioniPrimary (citable) accession number: B2K143
Entry historyi
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: May 14, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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