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B2K143 (B2K143_YERPB) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:YPTS_0336 EMBL ACC87325.1
OrganismYersinia pseudotuberculosis serotype IB (strain PB1/+) [Complete proteome] [HAMAP] EMBL ACC87325.1
Taxonomic identifier502801 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia

Protein attributes

Sequence length505 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Cell outer membrane By similarity RuleBase RU004004.

Sequence similarities

Belongs to the GSP D family.

Ontologies

Keywords
   Biological processTransport RuleBase RU004004
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processprotein secretion

Inferred from electronic annotation. Source: InterPro

   Cellular_componentcell outer membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionprotein transporter activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B2K143 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: 0554CC3CEDABD492

FASTA50555,700
        10         20         30         40         50         60 
MSLIYIMRKI TGLILLFFAT LLPYGKFSYG KAIPWQGEPF FIYSRGMTVS ELLKDLGMNY 

        70         80         90        100        110        120 
GIPVVISSEI NEHFTGKIRD KTPEKILSEL AGRYNITWYY DGETLYFYPV QSIKREFISP 

       130        140        150        160        170        180 
DGLAANTLVK YLQRGDVLAG KNCAIKAIPH LDTLEVKGVP ICIERVKSVS KMLSEQVRHQ 

       190        200        210        220        230        240 
NQNKETVKVF PLKYASAADS DYQYRDQNVR LPGLVSVLRE LNQGNNLPLA GGNQPDGNQA 

       250        260        270        280        290        300 
SSPVFSADPR QNAVIIRDRQ ANMPIYRSLI TQLDQRPIQI EISVTIIDVD AGDISQLGVD 

       310        320        330        340        350        360 
WSASASIGGT GVSFNSTFAK NNAEGFSTVI GDTGNFMVRL NALQKNSRAR ILSQPSVVTL 

       370        380        390        400        410        420 
NNIQAVLDKN VTFYTKLQGE KVAKLESVTS GSLLRVTPRM IETEGVQEVL LNLNIQDGQQ 

       430        440        450        460        470        480 
QASTNSNEPL PEIRNSDIST QATLQVGQSL LLGGFIQDTQ IESQNKIPLL GDIPLLGGLF 

       490        500 
RSTDKQSHSV VRLFLIKAVP VNAGE 

« Hide

References

[1]"Complete sequence of Yersinia pseudotuberculosis PB1/+."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Challacombe J.F., Green L., Lindler L.E., Nikolich M.P., Richardson P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PB1/+.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001048 Genomic DNA. Translation: ACC87325.1.
RefSeqYP_001870782.1. NC_010634.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING502801.YPTS_0336.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACC87325; ACC87325; YPTS_0336.
GeneID6260852.
KEGGypb:YPTS_0336.
PATRIC18648207. VBIYerPse20639_0351.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1450.
HOGENOMHOG000245123.
KOK03219.
OMATSTYYIQ.
OrthoDBEOG6423BN.

Enzyme and pathway databases

BioCycYPSE502801:GHIH-434-MONOMER.

Family and domain databases

InterProIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSPR01337. TYPE3OMGPROT.
TIGRFAMsTIGR02516. type_III_yscC. 1 hit.
PROSITEPS00875. T2SP_D. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2K143_YERPB
AccessionPrimary (citable) accession number: B2K143
Entry history
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: May 14, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)