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B2JR71 (B2JR71_BURP8) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Selenide, water dikinase HAMAP MF_00625
EC=2.7.9.3 HAMAP MF_00625
Alternative name(s):
Selenium donor protein HAMAP MF_00625
Selenophosphate synthase HAMAP MF_00625
Gene names
Name:selD HAMAP MF_00625
Ordered Locus Names:Bphy_4627
OrganismBurkholderia phymatum (strain DSM 17167 / STM815) [Complete proteome] [HAMAP]
Taxonomic identifier391038 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia

Protein attributes

Sequence length353 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes selenophosphate from selenide and ATP By similarity. HAMAP MF_00625 SAAS SAAS023061

Catalytic activity

ATP + selenide + H2O = AMP + selenophosphate + phosphate. HAMAP MF_00625 SAAS SAAS023061

Cofactor

Magnesium By similarity. HAMAP MF_00625 SAAS SAAS023061

Sequence similarities

Belongs to the selenophosphate synthase 1 family. Class I subfamily. HAMAP MF_00625

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding235 – 2417ATP By similarity HAMAP MF_00625

Sites

Active site221 By similarity HAMAP MF_00625
Site251Important for catalytic activity By similarity HAMAP MF_00625

Sequences

Sequence LengthMass (Da)Tools
B2JR71 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: 7110B36B452F0792

FASTA35336,319
        10         20         30         40         50         60 
MNEPAVTSNV PRLTSLSHGG GCGCKIAPGV LSDLLKRNLP RPSFPDLLVG TETSDDAAVY 

        70         80         90        100        110        120 
RLNDEQAIIA TTDFFMPIVD DPYDFGRIAA TNALSDVYAM GGKPILALAL VGMPINVLPH 

       130        140        150        160        170        180 
DVIAAVLRGG EDVCTLAGIP VAGGHSIDSV EPIYGLAALG VVHPKRVKRN ASAQAGDVLV 

       190        200        210        220        230        240 
LGKPLGVGVL SAALKKNQLD EAGYAAMIAA TTKLNRPGAE LAALDGVHAM TDVTGFGLLG 

       250        260        270        280        290        300 
HTLELARGAQ LTARVRYADL PWIAGAEAFA AAGVFTGASG RNWASYGDDV RLAGALPDTA 

       310        320        330        340        350 
RPLLTDPQTS GGLLVSCAPA AVDDVLAIFR ADGFERAAVI GELLDGAPRV EVM

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References

[1]"Complete sequence of chromosome 2 of Burkholderia phymatum STM815."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Bruce D., Goodwin L., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Mikhailova N., Bacher J., Blanchard J., Cohan F., James E., Lawrence J., Lizotte-Waniewski M., Moulin L., Rainey P., Riley M., Souza V., Wertz J., Young P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001044 Genomic DNA. Translation: ACC73737.1.
RefSeqYP_001860783.1. NC_010623.1.

3D structure databases

ProteinModelPortalB2JR71.
ModBaseSearch...

Protein-protein interaction databases

STRINGB2JR71.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6246144.
GenomeReviewsGene locus Bphy_4627 in contig CP001044_GR.
KEGGbph:Bphy_4627.
PATRIC19196002. VBIBurPhy25146_4887.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG383791.
OMAMMAIAIL.
ProtClustDBPRK00943.

Family and domain databases

HAMAPMF_00625. SelD.
[Tree]
InterProIPR000728. AIR_synth.
IPR010918. AIR_synth_C.
IPR016188. PurM_N-like.
IPR004536. SelD.
IPR023061. SelD_I.
[Graphical view]
KOK01008.
PfamPF00586. AIRS. 1 hit.
PF02769. AIRS_C. 1 hit.
[Graphical view]
PIRSFPIRSF036407. Selenphspht_syn. 1 hit.
SUPFAMSSF56042. AIR_synth_C. 1 hit.
SSF55326. PurM_N-like. 1 hit.
TIGRFAMsTIGR00476. SelD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB2JR71_BURP8
AccessionPrimary (citable) accession number: B2JR71
Entry history
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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