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Reviewed, UniProtKB/Swiss-Prot B2JJ71 (GCST_BURP8)

Last modified November 3, 2009. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Aminomethyltransferase
    EC=2.1.2.10
Alternative name(s):
    Glycine cleavage system T protein
Gene names
Name: gcvT
Ordered Locus Names: Bphy_3003
OrganismBurkholderia phymatum (strain DSM 17167 / STM815) [Complete proteome] [HAMAP]
Taxonomic identifier391038 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia

Protein attributes

Sequence length372 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Function

The glycine cleavage system catalyzes the degradation of glycine By similarity.

Catalytic activity

[Protein]-S(8)-aminomethyldihydrolipoyllysine + tetrahydrofolate = [protein]-dihydrolipoyllysine + 5,10-methylenetetrahydrofolate + NH3. HAMAP MF_00259

Subunit structure

The glycine cleavage system is composed of four proteins: P, T, L and H By similarity.

Sequence similarities

Belongs to the gcvT family.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 372372Aminomethyltransferase HAMAP MF_00259
PRO_1000114084

Sequences

Sequence LengthMass (Da)Tools
B2JJ71-1 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: 30C2FA34C7A2BDB0

FASTA37240,311
        10         20         30         40         50         60 
MTELKHTPLH ATHRALNARM VDFGGWDMPV NYGSQIEEHR AVRTDAGMFD VSHMCVVDFT 

        70         80         90        100        110        120 
GERVRAFFER ALANNVGKLQ TAGKALYSCL LNPQGGVIDD LIVYYFGEDH FRVVVNAGTA 

       130        140        150        160        170        180 
EKDIAWFNKL NDEEGFGLTI TPRRDYAIVA VQGPNAREKV WATVPHARAA SEALKPFNAA 

       190        200        210        220        230        240 
RVADTPFGEL TVARTGYTGE DGFEIIVPAA HVEALWNALQ AQGVRPAGLG ARDTLRLEAG 

       250        260        270        280        290        300 
MNLYGQDMDD DVSPLDAGLA WTVDLSAPRE FIGRAKLEAD GSKQSFVGLI LHKDNGKAAG 

       310        320        330        340        350        360 
VLRAHQKVVT PNGEGEITSG TFSPTMQESI AFARVPKGVQ PGDVVHVQIR DKALPASVVK 

       370 
LPFVRNGKVL VG 

« Hide

References

[1]"Complete sequence of chromosome 1 of Burkholderia phymatum STM815."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Bruce D., Goodwin L., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Mikhailova N., Bacher J., Blanchard J., Cohan F., James E., Lawrence J., Lizotte-Waniewski M., Moulin L., Rainey P., Riley M., Souza V., Wertz J., Young P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

CP001043 Genomic DNA. Translation: ACC72173.1.
RefSeqYP_001859219.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID6244484.
GenomeReviewsGene locus Bphy_3003 in contig CP001043_GR.
KEGGbph:Bphy_3003.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAVEIRGKW.

Family and domain databases

HAMAPMF_00259.
[Tree]
InterProIPR013977. GCV_T_C.
IPR006222. GCV_T_N.
IPR006223. GcvT.
[Graphical view]
PfamPF01571. GCV_T. 1 hit.
PF08669. GCV_T_C. 1 hit.
[Graphical view]
PIRSFPIRSF006487. GcvT. 1 hit.
TIGRFAMsTIGR00528. gcvT. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGCST_BURP8
AccessionPrimary (citable) accession number: B2JJ71
Entry history
Integrated into UniProtKB/Swiss-Prot: March 24, 2009
Last sequence update: June 10, 2008
Last modified: November 3, 2009
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents