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B2JIE7 (B2JIE7_BURP8) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length363 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site421Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2601Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1371Substrate By similarity HAMAP-Rule MF_01201
Binding site3081Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue421N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
B2JIE7 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: 3ACCED0071EA0076

FASTA36339,218
        10         20         30         40         50         60 
MSLRKYPMPR PVSATIHTAA LANNLAVARR YAPKSKIWAV VKANAYGHGL ARAFPGLRAT 

        70         80         90        100        110        120 
DGFGLLDLEE AVKLRELGWA GPILLLEGFF RPTDIDVIDR YSLTTALHSD EQLRMLEMAR 

       130        140        150        160        170        180 
LSKPVNIQLK MNSGMNRLGY TPEKFRAAWE RARACQGVGQ ITLMTHFSDA DSERGISHQM 

       190        200        210        220        230        240 
EAFERGAQGI AGARSLANSA ATLWYPEAHF DWVRPGVMLY GASPSGVSSA IKDTGLQPAM 

       250        260        270        280        290        300 
TLASELIAVQ TLAQGQTIGY GSTFTAREGM RIGVVACGYA DGYPRVAPEG TPIIVDGIRT 

       310        320        330        340        350        360 
RIVGRVSMDM ITVDLTPCPQ ANVGSRVELW GAQLPVDDVA QSCGTIGYEL VCAVAPRVPV 


RAE 

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References

[1]"Complete sequence of chromosome 1 of Burkholderia phymatum STM815."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Bruce D., Goodwin L., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Mikhailova N., Bacher J., Blanchard J., Cohan F., James E., Lawrence J., Lizotte-Waniewski M., Moulin L., Rainey P., Riley M., Souza V., Wertz J., Young P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17167 / STM815.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001043 Genomic DNA. Translation: ACC70541.1.
RefSeqYP_001857587.1. NC_010622.1.

3D structure databases

ProteinModelPortalB2JIE7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING391038.Bphy_1359.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACC70541; ACC70541; Bphy_1359.
GeneID6242850.
KEGGbph:Bphy_1359.
PATRIC19189026. VBIBurPhy25146_1445.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031446.
KOK01775.
OMASRLGLWH.
OrthoDBEOG6PP9NJ.

Enzyme and pathway databases

BioCycBPHY391038:GI4Z-1390-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB2JIE7_BURP8
AccessionPrimary (citable) accession number: B2JIE7
Entry history
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: July 9, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)