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B2JEM2 (B2JEM2_BURP8) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Pirin domain protein EMBL ACC71337.1
Gene names
Ordered Locus Names:Bphy_2162 EMBL ACC71337.1
OrganismBurkholderia phymatum (strain DSM 17167 / STM815) [Complete proteome] [HAMAP] EMBL ACC71337.1
Taxonomic identifier391038 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia ›

Protein attributes

Sequence length235 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pirin family. RuleBase RU003457

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
B2JEM2 [UniParc].

Last modified June 10, 2008. Version 1.
Checksum: D27338B06653B3B9

FASTA23525,722
        10         20         30         40         50         60 
MIRIRRSDER GHANHGWLNA KHSFSFADYY DPEHMHFGPL RVINEDRIAA GQGFGTHGHR 

        70         80         90        100        110        120 
DMEIVTYVLD GALSHRDSLG NGSTIRPGDV QRMSAGTGVM HSEFNASQDD PLHLLQIWII 

       130        140        150        160        170        180 
PKRTGDAPGY EEKRFEDADK RGRLRVVASP EGRDGSVTIH ADASIHAGLF DGAERAEYML 

       190        200        210        220        230 
EAGRQAYVHV ARGAVTVNGE ALKAGDAAMV SDATHVTVEN GEGAEVLLFD LGQLR

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References

[1]"Complete sequence of chromosome 1 of Burkholderia phymatum STM815."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Bruce D., Goodwin L., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Mikhailova N., Bacher J., Blanchard J., Cohan F., James E., Lawrence J., Lizotte-Waniewski M., Moulin L., Rainey P., Riley M., Souza V., Wertz J., Young P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17167 / STM815.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001043 Genomic DNA. Translation: ACC71337.1.
RefSeqYP_001858383.1. NC_010622.1.

3D structure databases

ProteinModelPortalB2JEM2.
ModBaseSearch...

Protein-protein interaction databases

STRING391038.Bphy_2162.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACC71337; ACC71337; Bphy_2162.
GeneID6243648.
KEGGbph:Bphy_2162.
PATRIC19190777. VBIBurPhy25146_2299.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1741.
HOGENOMHOG000114205.
KOK06911.
OMASVTIHAD.
ProtClustDBCLSK2314091.

Enzyme and pathway databases

BioCycBPHY391038:GI4Z-6872-MONOMER.

Family and domain databases

Gene3D2.60.120.10. 1 hit.
InterProIPR012093. Pirin.
IPR003829. Pirin_N_dom.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PANTHERPTHR13903. PTHR13903. 1 hit.
PfamPF02678. Pirin. 1 hit.
[Graphical view]
PIRSFPIRSF006232. Pirin. 1 hit.
SUPFAMSSF51182. RmlC_like_cupin. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB2JEM2_BURP8
AccessionPrimary (citable) accession number: B2JEM2
Entry history
Integrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: May 1, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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